RNA–Protein interactions for RNA: ENST00000640465.1

ZC3H11A-215, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 1 (best)

Gene ZC3H11A, Length 4,365 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-215ENST00000640465 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
ZC3H11A-215ENST00000640465 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
ZC3H11A-215ENST00000640465 KRTAP4-7Q9BYR0 210 aa1.59□□□□□ -2.16
ZC3H11A-215ENST00000640465 SPRR2GQ9BYE4 73 aa1.57□□□□□ -2.16
ZC3H11A-215ENST00000640465 MT1XP80297 61 aa1.55□□□□□ -2.16
ZC3H11A-215ENST00000640465 LCE4AQ5TA78 99 aa1.55□□□□□ -2.16
ZC3H11A-215ENST00000640465 KRTAP4-2Q9BYR5 136 aa1.55□□□□□ -2.16
ZC3H11A-215ENST00000640465 SPRR2FQ96RM1 72 aa1.54□□□□□ -2.16
ZC3H11A-215ENST00000640465 MT1FP04733 61 aa1.53□□□□□ -2.16
ZC3H11A-215ENST00000640465 MT1BP07438 61 aa1.52□□□□□ -2.17
ZC3H11A-215ENST00000640465 KRTAP12-4P60329 112 aa1.52□□□□□ -2.17
ZC3H11A-215ENST00000640465 KRTAP4-9Q9BYQ8 210 aa1.52□□□□□ -2.17
ZC3H11A-215ENST00000640465 MT1HP80294 61 aa1.51□□□□□ -2.17
ZC3H11A-215ENST00000640465 LCE1DQ5T752 114 aa1.51□□□□□ -2.17
ZC3H11A-215ENST00000640465 KRTAP9-3Q9BYQ3 159 aa1.51□□□□□ -2.17
ZC3H11A-215ENST00000640465 KRTAP9-8Q9BYQ0 159 aa1.51□□□□□ -2.17
ZC3H11A-215ENST00000640465 LCE3CQ5T5A8 94 aa1.5□□□□□ -2.17
ZC3H11A-215ENST00000640465 KRTAP2-3P0C7H8 128 aa1.5□□□□□ -2.17
ZC3H11A-215ENST00000640465 KRTAP2-4Q9BYR9 128 aa1.5□□□□□ -2.17
ZC3H11A-215ENST00000640465 KRTAP2-1Q9BYU5 128 aa1.5□□□□□ -2.17
ZC3H11A-215ENST00000640465 LCE1AQ5T7P2 110 aa1.49□□□□□ -2.17
ZC3H11A-215ENST00000640465 MT2AP02795 61 aa1.49□□□□□ -2.17
ZC3H11A-215ENST00000640465 KRTAP19-8Q3LI54 63 aa1.47□□□□□ -2.17
ZC3H11A-215ENST00000640465 KRTAP5-3Q6L8H2 238 aa1.46□□□□□ -2.18
ZC3H11A-215ENST00000640465 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
ZC3H11A-215ENST00000640465 KRTAP4-11Q9BYQ6 195 aa1.44□□□□□ -2.18
ZC3H11A-215ENST00000640465 LCE3EQ5T5B0 92 aa1.43□□□□□ -2.18
ZC3H11A-215ENST00000640465 LCE3DQ9BYE3 92 aa1.43□□□□□ -2.18
ZC3H11A-215ENST00000640465 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
ZC3H11A-215ENST00000640465 SPRR2EP22531 72 aa1.43□□□□□ -2.18
ZC3H11A-215ENST00000640465 SPRR2BP35325 72 aa1.43□□□□□ -2.18
ZC3H11A-215ENST00000640465 SPRR2AP35326 72 aa1.43□□□□□ -2.18
ZC3H11A-215ENST00000640465 KRTAP2-2Q9BYT5 123 aa1.43□□□□□ -2.18
ZC3H11A-215ENST00000640465 SSPOA2VEC9 5147 aa1.42□□□□□ -2.18
ZC3H11A-215ENST00000640465 KRTAP19-7Q3SYF9 63 aa1.41□□□□□ -2.18
ZC3H11A-215ENST00000640465 MUC12Q9UKN1 5478 aa1.41□□□□□ -2.18
ZC3H11A-215ENST00000640465 LCE1FQ5T754 118 aa1.4□□□□□ -2.19
ZC3H11A-215ENST00000640465 SPRR2DP22532 72 aa1.39□□□□□ -2.19
ZC3H11A-215ENST00000640465 LCE1BQ5T7P3 118 aa1.36□□□□□ -2.19
ZC3H11A-215ENST00000640465 KRTAP4-3Q9BYR4 195 aa1.36□□□□□ -2.19
ZC3H11A-215ENST00000640465 MT1GP13640 62 aa1.35□□□□□ -2.19
ZC3H11A-215ENST00000640465 MT1LQ93083 61 aa1.32□□□□□ -2.2
ZC3H11A-215ENST00000640465 LCE1CQ5T751 118 aa1.32□□□□□ -2.2
ZC3H11A-215ENST00000640465 LCE1EQ5T753 118 aa1.32□□□□□ -2.2
ZC3H11A-215ENST00000640465 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
ZC3H11A-215ENST00000640465 KRTAP20-1Q3LI63 56 aa1.3□□□□□ -2.2
ZC3H11A-215ENST00000640465 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
ZC3H11A-215ENST00000640465 MT1EP04732 61 aa1.29□□□□□ -2.2
ZC3H11A-215ENST00000640465 KRTAP6-3Q3LI67 103 aa1.28□□□□□ -2.21
ZC3H11A-215ENST00000640465 KRTAP19-6Q3LI70 58 aa1.26□□□□□ -2.21
ZC3H11A-215ENST00000640465 MT4P47944 62 aa1.26□□□□□ -2.21
ZC3H11A-215ENST00000640465 MDN1Q9NU22 5596 aa1.24□□□□□ -2.21
ZC3H11A-215ENST00000640465 NEBP20929 6669 aa1.23□□□□□ -2.21
ZC3H11A-215ENST00000640465 PRM1P04553 51 aa1.2□□□□□ -2.22
ZC3H11A-215ENST00000640465 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
ZC3H11A-215ENST00000640465 MT1MQ8N339 61 aa1.19□□□□□ -2.22
ZC3H11A-215ENST00000640465 KRTAP6-1Q3LI64 71 aa1.17□□□□□ -2.22
ZC3H11A-215ENST00000640465 MT1AP04731 61 aa1.14□□□□□ -2.23
ZC3H11A-215ENST00000640465 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
ZC3H11A-215ENST00000640465 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.11□□□□□ -2.23
ZC3H11A-215ENST00000640465 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
ZC3H11A-215ENST00000640465 KRTAP5-9P26371 169 aa1.08□□□□□ -2.24
ZC3H11A-215ENST00000640465 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
ZC3H11A-215ENST00000640465 KRTAP5-11Q6L8G4 156 aa1.01□□□□□ -2.25
ZC3H11A-215ENST00000640465 MUC5BQ9HC84 5762 aaPredicted RBP1□□□□□ -2.25
ZC3H11A-215ENST00000640465 KRTAP5-2Q701N4 177 aa0.99□□□□□ -2.25
ZC3H11A-215ENST00000640465 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
ZC3H11A-215ENST00000640465 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
ZC3H11A-215ENST00000640465 KRTAP5-4Q6L8H1 288 aa0.93□□□□□ -2.26
ZC3H11A-215ENST00000640465 KRTAP4-4Q9BYR3 166 aa0.92□□□□□ -2.26
ZC3H11A-215ENST00000640465 KRTAP5-1Q6L8H4 278 aa0.92□□□□□ -2.26
ZC3H11A-215ENST00000640465 KRTAP5-7Q6L8G8 165 aa0.89□□□□□ -2.27
ZC3H11A-215ENST00000640465 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
ZC3H11A-215ENST00000640465 KRTAP5-8O75690 187 aa0.85□□□□□ -2.27
ZC3H11A-215ENST00000640465 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
ZC3H11A-215ENST00000640465 KRTAP21-2Q3LI59 83 aa0.77□□□□□ -2.29
ZC3H11A-215ENST00000640465 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
ZC3H11A-215ENST00000640465 MUC16Q8WXI7 14507 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 14.6 ms