RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 SPRR2DP22532 72 aa5.53□□□□□ -1.52
PAX6-268ENST00000640287 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
PAX6-268ENST00000640287 KRTAP19-3Q7Z4W3 81 aa5.51□□□□□ -1.53
PAX6-268ENST00000640287 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
PAX6-268ENST00000640287 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
PAX6-268ENST00000640287 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
PAX6-268ENST00000640287 MT1LQ93083 61 aa5.43□□□□□ -1.54
PAX6-268ENST00000640287 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
PAX6-268ENST00000640287 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
PAX6-268ENST00000640287 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
PAX6-268ENST00000640287 MT1GP13640 62 aa5.41□□□□□ -1.54
PAX6-268ENST00000640287 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
PAX6-268ENST00000640287 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
PAX6-268ENST00000640287 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
PAX6-268ENST00000640287 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
PAX6-268ENST00000640287 MT1MQ8N339 61 aa5.32□□□□□ -1.56
PAX6-268ENST00000640287 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
PAX6-268ENST00000640287 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
PAX6-268ENST00000640287 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
PAX6-268ENST00000640287 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
PAX6-268ENST00000640287 PRO0628Q9UI54 55 aa5.24□□□□□ -1.57
PAX6-268ENST00000640287 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
PAX6-268ENST00000640287 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
PAX6-268ENST00000640287 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
PAX6-268ENST00000640287 A0A0A0MQY5 61 aa5.14□□□□□ -1.59
PAX6-268ENST00000640287 LCE4AQ5TA78 99 aa5.13□□□□□ -1.59
PAX6-268ENST00000640287 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
PAX6-268ENST00000640287 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
PAX6-268ENST00000640287 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
PAX6-268ENST00000640287 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
PAX6-268ENST00000640287 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
PAX6-268ENST00000640287 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
PAX6-268ENST00000640287 MT4P47944 62 aa4.82□□□□□ -1.64
PAX6-268ENST00000640287 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
PAX6-268ENST00000640287 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
PAX6-268ENST00000640287 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
PAX6-268ENST00000640287 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
PAX6-268ENST00000640287 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
PAX6-268ENST00000640287 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
PAX6-268ENST00000640287 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
PAX6-268ENST00000640287 MT1AP04731 61 aa4.62□□□□□ -1.67
PAX6-268ENST00000640287 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
PAX6-268ENST00000640287 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
PAX6-268ENST00000640287 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
PAX6-268ENST00000640287 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
PAX6-268ENST00000640287 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
PAX6-268ENST00000640287 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
PAX6-268ENST00000640287 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
PAX6-268ENST00000640287 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
PAX6-268ENST00000640287 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
PAX6-268ENST00000640287 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
PAX6-268ENST00000640287 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
PAX6-268ENST00000640287 KRTAP5-10Q6L8G5 202 aa4.24□□□□□ -1.73
PAX6-268ENST00000640287 MT3P25713 68 aa4.23□□□□□ -1.73
PAX6-268ENST00000640287 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
PAX6-268ENST00000640287 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
PAX6-268ENST00000640287 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
PAX6-268ENST00000640287 NDUFAF8A1L188 74 aa3.84□□□□□ -1.8
PAX6-268ENST00000640287 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
PAX6-268ENST00000640287 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
PAX6-268ENST00000640287 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
PAX6-268ENST00000640287 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
PAX6-268ENST00000640287 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
PAX6-268ENST00000640287 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
PAX6-268ENST00000640287 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
PAX6-268ENST00000640287 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
PAX6-268ENST00000640287 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
PAX6-268ENST00000640287 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
PAX6-268ENST00000640287 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
PAX6-268ENST00000640287 INE1O15225 51 aa3.19□□□□□ -1.9
PAX6-268ENST00000640287 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
PAX6-268ENST00000640287 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
PAX6-268ENST00000640287 PRM1P04553 51 aa2.92□□□□□ -1.94
PAX6-268ENST00000640287 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
PAX6-268ENST00000640287 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
PAX6-268ENST00000640287 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
PAX6-268ENST00000640287 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
PAX6-268ENST00000640287 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 77.2 ms