RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
HLA-C-210ENST00000640219 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
HLA-C-210ENST00000640219 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
HLA-C-210ENST00000640219 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
HLA-C-210ENST00000640219 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
HLA-C-210ENST00000640219 H3BS24 57 aa5.6□□□□□ -1.51
HLA-C-210ENST00000640219 DSTQ03001 7570 aaKnown RBP5.56□□□□□ -1.52
HLA-C-210ENST00000640219 TNP1P09430 55 aa5.54□□□□□ -1.52
HLA-C-210ENST00000640219 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
HLA-C-210ENST00000640219 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
HLA-C-210ENST00000640219 NDUFAF8A1L188 74 aa5.44□□□□□ -1.54
HLA-C-210ENST00000640219 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
HLA-C-210ENST00000640219 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
HLA-C-210ENST00000640219 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
HLA-C-210ENST00000640219 KRTAP5-10Q6L8G5 202 aa5.35□□□□□ -1.55
HLA-C-210ENST00000640219 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
HLA-C-210ENST00000640219 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
HLA-C-210ENST00000640219 MT4P47944 62 aa5.29□□□□□ -1.56
HLA-C-210ENST00000640219 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
HLA-C-210ENST00000640219 KRTAP5-7Q6L8G8 165 aa5.24□□□□□ -1.57
HLA-C-210ENST00000640219 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
HLA-C-210ENST00000640219 KRTAP19-3Q7Z4W3 81 aa5.16□□□□□ -1.58
HLA-C-210ENST00000640219 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
HLA-C-210ENST00000640219 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
HLA-C-210ENST00000640219 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
HLA-C-210ENST00000640219 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
HLA-C-210ENST00000640219 MT1EP04732 61 aa5.06□□□□□ -1.6
HLA-C-210ENST00000640219 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
HLA-C-210ENST00000640219 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
HLA-C-210ENST00000640219 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
HLA-C-210ENST00000640219 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
HLA-C-210ENST00000640219 MT1GP13640 62 aa4.96□□□□□ -1.62
HLA-C-210ENST00000640219 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
HLA-C-210ENST00000640219 MT1MQ8N339 61 aa4.87□□□□□ -1.63
HLA-C-210ENST00000640219 MT1LQ93083 61 aa4.81□□□□□ -1.64
HLA-C-210ENST00000640219 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
HLA-C-210ENST00000640219 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
HLA-C-210ENST00000640219 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
HLA-C-210ENST00000640219 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
HLA-C-210ENST00000640219 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
HLA-C-210ENST00000640219 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
HLA-C-210ENST00000640219 INE1O15225 51 aa4.58□□□□□ -1.68
HLA-C-210ENST00000640219 AHNAKQ09666 5890 aaKnown RBP4.53□□□□□ -1.68
HLA-C-210ENST00000640219 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
HLA-C-210ENST00000640219 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
HLA-C-210ENST00000640219 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
HLA-C-210ENST00000640219 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.69
HLA-C-210ENST00000640219 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
HLA-C-210ENST00000640219 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
HLA-C-210ENST00000640219 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
HLA-C-210ENST00000640219 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
HLA-C-210ENST00000640219 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
HLA-C-210ENST00000640219 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
HLA-C-210ENST00000640219 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
HLA-C-210ENST00000640219 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
HLA-C-210ENST00000640219 MT1AP04731 61 aa4.06□□□□□ -1.76
HLA-C-210ENST00000640219 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
HLA-C-210ENST00000640219 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
HLA-C-210ENST00000640219 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
HLA-C-210ENST00000640219 MT3P25713 68 aa3.71□□□□□ -1.82
HLA-C-210ENST00000640219 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
HLA-C-210ENST00000640219 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
HLA-C-210ENST00000640219 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
HLA-C-210ENST00000640219 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
HLA-C-210ENST00000640219 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
HLA-C-210ENST00000640219 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
HLA-C-210ENST00000640219 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
HLA-C-210ENST00000640219 PRM1P04553 51 aa3.28□□□□□ -1.88
HLA-C-210ENST00000640219 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
HLA-C-210ENST00000640219 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
HLA-C-210ENST00000640219 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
HLA-C-210ENST00000640219 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
HLA-C-210ENST00000640219 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
HLA-C-210ENST00000640219 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
HLA-C-210ENST00000640219 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
HLA-C-210ENST00000640219 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
HLA-C-210ENST00000640219 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 248.2 ms