RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
KCNMA1-262ENST00000639489 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
KCNMA1-262ENST00000639489 LCE2AQ5TA79 106 aaPredicted RBP4.92□□□□□ -1.62
KCNMA1-262ENST00000639489 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
KCNMA1-262ENST00000639489 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
KCNMA1-262ENST00000639489 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
KCNMA1-262ENST00000639489 KRTAP9-2Q9BYQ4 174 aa4.76□□□□□ -1.65
KCNMA1-262ENST00000639489 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
KCNMA1-262ENST00000639489 MT1MQ8N339 61 aa4.76□□□□□ -1.65
KCNMA1-262ENST00000639489 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
KCNMA1-262ENST00000639489 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
KCNMA1-262ENST00000639489 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
KCNMA1-262ENST00000639489 USH2AO75445 5202 aa4.7□□□□□ -1.66
KCNMA1-262ENST00000639489 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
KCNMA1-262ENST00000639489 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
KCNMA1-262ENST00000639489 LCE2DQ5TA82 110 aaPredicted RBP4.56□□□□□ -1.68
KCNMA1-262ENST00000639489 KMT2DO14686 5537 aa4.54□□□□□ -1.68
KCNMA1-262ENST00000639489 MT4P47944 62 aa4.49□□□□□ -1.69
KCNMA1-262ENST00000639489 MT3P25713 68 aa4.43□□□□□ -1.7
KCNMA1-262ENST00000639489 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
KCNMA1-262ENST00000639489 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
KCNMA1-262ENST00000639489 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
KCNMA1-262ENST00000639489 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
KCNMA1-262ENST00000639489 MT1AP04731 61 aa4.33□□□□□ -1.72
KCNMA1-262ENST00000639489 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
KCNMA1-262ENST00000639489 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
KCNMA1-262ENST00000639489 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
KCNMA1-262ENST00000639489 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
KCNMA1-262ENST00000639489 PRM1P04553 51 aa4.27□□□□□ -1.73
KCNMA1-262ENST00000639489 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
KCNMA1-262ENST00000639489 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
KCNMA1-262ENST00000639489 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
KCNMA1-262ENST00000639489 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
KCNMA1-262ENST00000639489 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
KCNMA1-262ENST00000639489 SSPOA2VEC9 5147 aa4.2□□□□□ -1.74
KCNMA1-262ENST00000639489 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
KCNMA1-262ENST00000639489 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
KCNMA1-262ENST00000639489 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
KCNMA1-262ENST00000639489 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
KCNMA1-262ENST00000639489 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
KCNMA1-262ENST00000639489 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
KCNMA1-262ENST00000639489 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
KCNMA1-262ENST00000639489 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
KCNMA1-262ENST00000639489 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
KCNMA1-262ENST00000639489 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
KCNMA1-262ENST00000639489 NEBP20929 6669 aa3.79□□□□□ -1.8
KCNMA1-262ENST00000639489 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
KCNMA1-262ENST00000639489 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
KCNMA1-262ENST00000639489 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
KCNMA1-262ENST00000639489 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
KCNMA1-262ENST00000639489 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
KCNMA1-262ENST00000639489 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
KCNMA1-262ENST00000639489 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
KCNMA1-262ENST00000639489 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
KCNMA1-262ENST00000639489 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
KCNMA1-262ENST00000639489 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
KCNMA1-262ENST00000639489 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
KCNMA1-262ENST00000639489 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
KCNMA1-262ENST00000639489 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
KCNMA1-262ENST00000639489 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
KCNMA1-262ENST00000639489 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
KCNMA1-262ENST00000639489 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
KCNMA1-262ENST00000639489 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
KCNMA1-262ENST00000639489 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
KCNMA1-262ENST00000639489 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
KCNMA1-262ENST00000639489 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
KCNMA1-262ENST00000639489 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
KCNMA1-262ENST00000639489 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
KCNMA1-262ENST00000639489 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
KCNMA1-262ENST00000639489 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
KCNMA1-262ENST00000639489 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.05
KCNMA1-262ENST00000639489 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
KCNMA1-262ENST00000639489 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
KCNMA1-262ENST00000639489 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
KCNMA1-262ENST00000639489 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
KCNMA1-262ENST00000639489 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
KCNMA1-262ENST00000639489 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 92.6 ms