RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 KMT2DO14686 5537 aa3.56□□□□□ -1.84
KCNMA1-259ENST00000639406 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
KCNMA1-259ENST00000639406 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
KCNMA1-259ENST00000639406 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
KCNMA1-259ENST00000639406 MT1BP07438 61 aa3.48□□□□□ -1.85
KCNMA1-259ENST00000639406 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
KCNMA1-259ENST00000639406 KRTAP4-8Q9BYQ9 185 aa3.48□□□□□ -1.85
KCNMA1-259ENST00000639406 MT4P47944 62 aa3.47□□□□□ -1.85
KCNMA1-259ENST00000639406 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
KCNMA1-259ENST00000639406 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
KCNMA1-259ENST00000639406 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
KCNMA1-259ENST00000639406 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
KCNMA1-259ENST00000639406 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
KCNMA1-259ENST00000639406 KRTAP9-3Q9BYQ3 159 aa3.42□□□□□ -1.86
KCNMA1-259ENST00000639406 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.86
KCNMA1-259ENST00000639406 MT1LQ93083 61 aa3.39□□□□□ -1.87
KCNMA1-259ENST00000639406 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
KCNMA1-259ENST00000639406 MT3P25713 68 aa3.36□□□□□ -1.87
KCNMA1-259ENST00000639406 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
KCNMA1-259ENST00000639406 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
KCNMA1-259ENST00000639406 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
KCNMA1-259ENST00000639406 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
KCNMA1-259ENST00000639406 KRTAP19-2Q3LHN2 52 aa3.3□□□□□ -1.88
KCNMA1-259ENST00000639406 MT1EP04732 61 aa3.27□□□□□ -1.89
KCNMA1-259ENST00000639406 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
KCNMA1-259ENST00000639406 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
KCNMA1-259ENST00000639406 MT1MQ8N339 61 aa3.17□□□□□ -1.9
KCNMA1-259ENST00000639406 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
KCNMA1-259ENST00000639406 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.9
KCNMA1-259ENST00000639406 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.91
KCNMA1-259ENST00000639406 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
KCNMA1-259ENST00000639406 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
KCNMA1-259ENST00000639406 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
KCNMA1-259ENST00000639406 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
KCNMA1-259ENST00000639406 LCE5AQ5TCM9 118 aa3.12□□□□□ -1.91
KCNMA1-259ENST00000639406 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
KCNMA1-259ENST00000639406 MT1AP04731 61 aa3.04□□□□□ -1.92
KCNMA1-259ENST00000639406 SSPOA2VEC9 5147 aa3.04□□□□□ -1.92
KCNMA1-259ENST00000639406 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
KCNMA1-259ENST00000639406 NEBP20929 6669 aa2.97□□□□□ -1.93
KCNMA1-259ENST00000639406 KRTAP19-7Q3SYF9 63 aa2.95□□□□□ -1.94
KCNMA1-259ENST00000639406 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
KCNMA1-259ENST00000639406 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
KCNMA1-259ENST00000639406 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
KCNMA1-259ENST00000639406 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
KCNMA1-259ENST00000639406 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.96
KCNMA1-259ENST00000639406 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
KCNMA1-259ENST00000639406 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
KCNMA1-259ENST00000639406 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
KCNMA1-259ENST00000639406 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.96
KCNMA1-259ENST00000639406 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
KCNMA1-259ENST00000639406 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
KCNMA1-259ENST00000639406 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
KCNMA1-259ENST00000639406 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
KCNMA1-259ENST00000639406 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
KCNMA1-259ENST00000639406 KRTAP4-6Q9BYQ5 205 aa2.36□□□□□ -2.03
KCNMA1-259ENST00000639406 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
KCNMA1-259ENST00000639406 KRTAP5-3Q6L8H2 238 aa2.26□□□□□ -2.05
KCNMA1-259ENST00000639406 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
KCNMA1-259ENST00000639406 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
KCNMA1-259ENST00000639406 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
KCNMA1-259ENST00000639406 KRTAP4-2Q9BYR5 136 aa2.14□□□□□ -2.07
KCNMA1-259ENST00000639406 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
KCNMA1-259ENST00000639406 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
KCNMA1-259ENST00000639406 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
KCNMA1-259ENST00000639406 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
KCNMA1-259ENST00000639406 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
KCNMA1-259ENST00000639406 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
KCNMA1-259ENST00000639406 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
KCNMA1-259ENST00000639406 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
KCNMA1-259ENST00000639406 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
KCNMA1-259ENST00000639406 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
KCNMA1-259ENST00000639406 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
KCNMA1-259ENST00000639406 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
KCNMA1-259ENST00000639406 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
KCNMA1-259ENST00000639406 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.29□□□□□ -2.2
KCNMA1-259ENST00000639406 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 103.6 ms