RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
SCARB2-215ENST00000639145 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
SCARB2-215ENST00000639145 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
SCARB2-215ENST00000639145 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
SCARB2-215ENST00000639145 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
SCARB2-215ENST00000639145 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
SCARB2-215ENST00000639145 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
SCARB2-215ENST00000639145 MT1EP04732 61 aa4.56□□□□□ -1.68
SCARB2-215ENST00000639145 MT1LQ93083 61 aa4.55□□□□□ -1.68
SCARB2-215ENST00000639145 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
SCARB2-215ENST00000639145 MUC12Q9UKN1 5478 aa4.52□□□□□ -1.69
SCARB2-215ENST00000639145 LCE2DQ5TA82 110 aaPredicted RBP4.51□□□□□ -1.69
SCARB2-215ENST00000639145 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
SCARB2-215ENST00000639145 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
SCARB2-215ENST00000639145 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
SCARB2-215ENST00000639145 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
SCARB2-215ENST00000639145 MT1MQ8N339 61 aa4.41□□□□□ -1.7
SCARB2-215ENST00000639145 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
SCARB2-215ENST00000639145 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
SCARB2-215ENST00000639145 MT4P47944 62 aa4.33□□□□□ -1.72
SCARB2-215ENST00000639145 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
SCARB2-215ENST00000639145 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
SCARB2-215ENST00000639145 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
SCARB2-215ENST00000639145 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
SCARB2-215ENST00000639145 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
SCARB2-215ENST00000639145 MT3P25713 68 aa4.13□□□□□ -1.75
SCARB2-215ENST00000639145 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
SCARB2-215ENST00000639145 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
SCARB2-215ENST00000639145 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
SCARB2-215ENST00000639145 KRTAP20-1Q3LI63 56 aa4.04□□□□□ -1.76
SCARB2-215ENST00000639145 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
SCARB2-215ENST00000639145 MT1AP04731 61 aa4□□□□□ -1.77
SCARB2-215ENST00000639145 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
SCARB2-215ENST00000639145 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
SCARB2-215ENST00000639145 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.77
SCARB2-215ENST00000639145 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
SCARB2-215ENST00000639145 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
SCARB2-215ENST00000639145 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
SCARB2-215ENST00000639145 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
SCARB2-215ENST00000639145 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
SCARB2-215ENST00000639145 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
SCARB2-215ENST00000639145 PRM1P04553 51 aa3.78□□□□□ -1.81
SCARB2-215ENST00000639145 NEBP20929 6669 aa3.72□□□□□ -1.81
SCARB2-215ENST00000639145 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
SCARB2-215ENST00000639145 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
SCARB2-215ENST00000639145 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
SCARB2-215ENST00000639145 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
SCARB2-215ENST00000639145 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
SCARB2-215ENST00000639145 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
SCARB2-215ENST00000639145 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
SCARB2-215ENST00000639145 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
SCARB2-215ENST00000639145 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
SCARB2-215ENST00000639145 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
SCARB2-215ENST00000639145 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
SCARB2-215ENST00000639145 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
SCARB2-215ENST00000639145 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
SCARB2-215ENST00000639145 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
SCARB2-215ENST00000639145 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
SCARB2-215ENST00000639145 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
SCARB2-215ENST00000639145 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
SCARB2-215ENST00000639145 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
SCARB2-215ENST00000639145 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
SCARB2-215ENST00000639145 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
SCARB2-215ENST00000639145 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
SCARB2-215ENST00000639145 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
SCARB2-215ENST00000639145 KRTAP5-8O75690 187 aa2.59□□□□□ -2
SCARB2-215ENST00000639145 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
SCARB2-215ENST00000639145 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
SCARB2-215ENST00000639145 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
SCARB2-215ENST00000639145 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
SCARB2-215ENST00000639145 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
SCARB2-215ENST00000639145 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
SCARB2-215ENST00000639145 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
SCARB2-215ENST00000639145 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
SCARB2-215ENST00000639145 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
SCARB2-215ENST00000639145 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
SCARB2-215ENST00000639145 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 67.7 ms