RNA–Protein interactions for RNA: ENST00000638903.1

PAX6-243, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-243ENST00000638903 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
PAX6-243ENST00000638903 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
PAX6-243ENST00000638903 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
PAX6-243ENST00000638903 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
PAX6-243ENST00000638903 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
PAX6-243ENST00000638903 MT1LQ93083 61 aa3.94□□□□□ -1.78
PAX6-243ENST00000638903 FSIP2Q5CZC0 6907 aa3.94□□□□□ -1.78
PAX6-243ENST00000638903 MT1EP04732 61 aa3.91□□□□□ -1.78
PAX6-243ENST00000638903 FCGBPQ9Y6R7 5405 aaPredicted RBP3.85□□□□□ -1.79
PAX6-243ENST00000638903 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
PAX6-243ENST00000638903 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
PAX6-243ENST00000638903 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
PAX6-243ENST00000638903 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
PAX6-243ENST00000638903 MT1GP13640 62 aa3.71□□□□□ -1.82
PAX6-243ENST00000638903 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
PAX6-243ENST00000638903 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
PAX6-243ENST00000638903 MT1MQ8N339 61 aa3.64□□□□□ -1.83
PAX6-243ENST00000638903 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
PAX6-243ENST00000638903 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
PAX6-243ENST00000638903 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
PAX6-243ENST00000638903 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
PAX6-243ENST00000638903 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
PAX6-243ENST00000638903 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
PAX6-243ENST00000638903 NEBP20929 6669 aa3.52□□□□□ -1.85
PAX6-243ENST00000638903 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
PAX6-243ENST00000638903 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
PAX6-243ENST00000638903 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
PAX6-243ENST00000638903 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
PAX6-243ENST00000638903 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
PAX6-243ENST00000638903 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
PAX6-243ENST00000638903 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
PAX6-243ENST00000638903 MT1AP04731 61 aa3.41□□□□□ -1.86
PAX6-243ENST00000638903 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
PAX6-243ENST00000638903 SPRR2EP22531 72 aa3.4□□□□□ -1.87
PAX6-243ENST00000638903 SPRR2BP35325 72 aa3.4□□□□□ -1.87
PAX6-243ENST00000638903 SPRR2AP35326 72 aa3.4□□□□□ -1.87
PAX6-243ENST00000638903 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
PAX6-243ENST00000638903 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
PAX6-243ENST00000638903 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
PAX6-243ENST00000638903 LCE1DQ5T752 114 aa3.31□□□□□ -1.88
PAX6-243ENST00000638903 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
PAX6-243ENST00000638903 SPRR2DP22532 72 aa3.29□□□□□ -1.88
PAX6-243ENST00000638903 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
PAX6-243ENST00000638903 PRM1P04553 51 aa3.27□□□□□ -1.89
PAX6-243ENST00000638903 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
PAX6-243ENST00000638903 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
PAX6-243ENST00000638903 LCE4AQ5TA78 99 aa3.15□□□□□ -1.9
PAX6-243ENST00000638903 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
PAX6-243ENST00000638903 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
PAX6-243ENST00000638903 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
PAX6-243ENST00000638903 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
PAX6-243ENST00000638903 MT3P25713 68 aa2.97□□□□□ -1.93
PAX6-243ENST00000638903 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
PAX6-243ENST00000638903 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
PAX6-243ENST00000638903 MT4P47944 62 aa2.82□□□□□ -1.96
PAX6-243ENST00000638903 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
PAX6-243ENST00000638903 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
PAX6-243ENST00000638903 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
PAX6-243ENST00000638903 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
PAX6-243ENST00000638903 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
PAX6-243ENST00000638903 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
PAX6-243ENST00000638903 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
PAX6-243ENST00000638903 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
PAX6-243ENST00000638903 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
PAX6-243ENST00000638903 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
PAX6-243ENST00000638903 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
PAX6-243ENST00000638903 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
PAX6-243ENST00000638903 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
PAX6-243ENST00000638903 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.04
PAX6-243ENST00000638903 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
PAX6-243ENST00000638903 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
PAX6-243ENST00000638903 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
PAX6-243ENST00000638903 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
PAX6-243ENST00000638903 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
PAX6-243ENST00000638903 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.1
PAX6-243ENST00000638903 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
PAX6-243ENST00000638903 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 135.8 ms