RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 SYNE2Q8WXH0 6885 aaKnown RBP7.56□□□□□ -1.2
SCARB2-212ENST00000638663 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
SCARB2-212ENST00000638663 LUZP6Q538Z0 58 aa7.54□□□□□ -1.2
SCARB2-212ENST00000638663 KRTAP19-4Q3LI73 84 aa7.54□□□□□ -1.2
SCARB2-212ENST00000638663 KRTAP19-3Q7Z4W3 81 aa7.52□□□□□ -1.21
SCARB2-212ENST00000638663 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.48□□□□□ -1.21
SCARB2-212ENST00000638663 KRTAP5-9P26371 169 aa7.48□□□□□ -1.21
SCARB2-212ENST00000638663 MT1GP13640 62 aa7.44□□□□□ -1.22
SCARB2-212ENST00000638663 MT1MQ8N339 61 aa7.39□□□□□ -1.23
SCARB2-212ENST00000638663 LCE5AQ5TCM9 118 aa7.37□□□□□ -1.23
SCARB2-212ENST00000638663 KRTAP4-3Q9BYR4 195 aa7.32□□□□□ -1.24
SCARB2-212ENST00000638663 KRTAP6-3Q3LI67 103 aa7.31□□□□□ -1.24
SCARB2-212ENST00000638663 MDN1Q9NU22 5596 aa7.29□□□□□ -1.24
SCARB2-212ENST00000638663 KRTAP9-6A8MVA2 160 aa7.29□□□□□ -1.24
SCARB2-212ENST00000638663 LCE1AQ5T7P2 110 aa7.29□□□□□ -1.24
SCARB2-212ENST00000638663 SPRR2EP22531 72 aa7.23□□□□□ -1.25
SCARB2-212ENST00000638663 SPRR2BP35325 72 aa7.23□□□□□ -1.25
SCARB2-212ENST00000638663 SPRR2AP35326 72 aa7.23□□□□□ -1.25
SCARB2-212ENST00000638663 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
SCARB2-212ENST00000638663 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
SCARB2-212ENST00000638663 DSTQ03001 7570 aaKnown RBP6.99□□□□□ -1.29
SCARB2-212ENST00000638663 SPRR2DP22532 72 aa6.96□□□□□ -1.3
SCARB2-212ENST00000638663 NEBP20929 6669 aa6.78□□□□□ -1.32
SCARB2-212ENST00000638663 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
SCARB2-212ENST00000638663 KRTAP2-3P0C7H8 128 aa6.72□□□□□ -1.33
SCARB2-212ENST00000638663 KRTAP2-4Q9BYR9 128 aa6.72□□□□□ -1.33
SCARB2-212ENST00000638663 KRTAP2-1Q9BYU5 128 aa6.72□□□□□ -1.33
SCARB2-212ENST00000638663 LCE3BQ5TA77 95 aa6.67□□□□□ -1.34
SCARB2-212ENST00000638663 KRTAP5-5Q701N2 237 aaPredicted RBP6.63□□□□□ -1.35
SCARB2-212ENST00000638663 MT1AP04731 61 aa6.53□□□□□ -1.36
SCARB2-212ENST00000638663 KRTAP6-1Q3LI64 71 aa6.52□□□□□ -1.37
SCARB2-212ENST00000638663 SYNE1Q8NF91 8797 aaKnown RBP6.3□□□□□ -1.4
SCARB2-212ENST00000638663 KRTAP5-4Q6L8H1 288 aa6.27□□□□□ -1.41
SCARB2-212ENST00000638663 KRTAP2-2Q9BYT5 123 aa6.25□□□□□ -1.41
SCARB2-212ENST00000638663 KRTAP20-1Q3LI63 56 aa6.24□□□□□ -1.41
SCARB2-212ENST00000638663 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
SCARB2-212ENST00000638663 INE1O15225 51 aa6.19□□□□□ -1.42
SCARB2-212ENST00000638663 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
SCARB2-212ENST00000638663 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
SCARB2-212ENST00000638663 MT4P47944 62 aa6.08□□□□□ -1.44
SCARB2-212ENST00000638663 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
SCARB2-212ENST00000638663 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
SCARB2-212ENST00000638663 KRTAP6-2Q3LI66 62 aa5.99□□□□□ -1.45
SCARB2-212ENST00000638663 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
SCARB2-212ENST00000638663 MT3P25713 68 aa5.91□□□□□ -1.46
SCARB2-212ENST00000638663 KRTAP20-2Q3LI61 65 aa5.89□□□□□ -1.47
SCARB2-212ENST00000638663 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
SCARB2-212ENST00000638663 LCE3DQ9BYE3 92 aa5.77□□□□□ -1.49
SCARB2-212ENST00000638663 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
SCARB2-212ENST00000638663 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
SCARB2-212ENST00000638663 LCE3EQ5T5B0 92 aa5.62□□□□□ -1.51
SCARB2-212ENST00000638663 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
SCARB2-212ENST00000638663 AHNAK2Q8IVF2 5795 aa5.12□□□□□ -1.59
SCARB2-212ENST00000638663 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
SCARB2-212ENST00000638663 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
SCARB2-212ENST00000638663 PRM1P04553 51 aa4.97□□□□□ -1.61
SCARB2-212ENST00000638663 KRTAP5-1Q6L8H4 278 aa4.94□□□□□ -1.62
SCARB2-212ENST00000638663 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
SCARB2-212ENST00000638663 LCE1BQ5T7P3 118 aa4.86□□□□□ -1.63
SCARB2-212ENST00000638663 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
SCARB2-212ENST00000638663 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
SCARB2-212ENST00000638663 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
SCARB2-212ENST00000638663 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
SCARB2-212ENST00000638663 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
SCARB2-212ENST00000638663 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
SCARB2-212ENST00000638663 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
SCARB2-212ENST00000638663 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
SCARB2-212ENST00000638663 KRTAP21-2Q3LI59 83 aa4.25□□□□□ -1.73
SCARB2-212ENST00000638663 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.73
SCARB2-212ENST00000638663 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
SCARB2-212ENST00000638663 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
SCARB2-212ENST00000638663 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
SCARB2-212ENST00000638663 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
SCARB2-212ENST00000638663 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
SCARB2-212ENST00000638663 PHGR1C9JFL3 82 aa3.6□□□□□ -1.83
SCARB2-212ENST00000638663 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
SCARB2-212ENST00000638663 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
SCARB2-212ENST00000638663 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 129.1 ms