RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
CACNA1A-258ENST00000638029 LRP2P98164 4655 aa4.93□□□□□ -1.62
CACNA1A-258ENST00000638029 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
CACNA1A-258ENST00000638029 MT1MQ8N339 61 aa4.88□□□□□ -1.63
CACNA1A-258ENST00000638029 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
CACNA1A-258ENST00000638029 HYDINQ4G0P3 5121 aa4.73□□□□□ -1.65
CACNA1A-258ENST00000638029 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
CACNA1A-258ENST00000638029 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.67
CACNA1A-258ENST00000638029 KIAA1109Q2LD37 5005 aa4.64□□□□□ -1.67
CACNA1A-258ENST00000638029 MUC17Q685J3 4493 aa4.62□□□□□ -1.67
CACNA1A-258ENST00000638029 HERC2O95714 4834 aa4.6□□□□□ -1.67
CACNA1A-258ENST00000638029 BIRC6Q9NR09 4857 aa4.59□□□□□ -1.67
CACNA1A-258ENST00000638029 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
CACNA1A-258ENST00000638029 HERC1Q15751 4861 aa4.55□□□□□ -1.68
CACNA1A-258ENST00000638029 EPPK1P58107 5090 aaKnown RBP4.54□□□□□ -1.68
CACNA1A-258ENST00000638029 KMT2CQ8NEZ4 4911 aaKnown RBP4.54□□□□□ -1.68
CACNA1A-258ENST00000638029 RYR2Q92736 4967 aa4.53□□□□□ -1.68
CACNA1A-258ENST00000638029 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
CACNA1A-258ENST00000638029 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
CACNA1A-258ENST00000638029 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
CACNA1A-258ENST00000638029 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
CACNA1A-258ENST00000638029 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
CACNA1A-258ENST00000638029 MT1AP04731 61 aa4.49□□□□□ -1.69
CACNA1A-258ENST00000638029 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
CACNA1A-258ENST00000638029 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
CACNA1A-258ENST00000638029 KRTAP6-3Q3LI67 103 aa4.31□□□□□ -1.72
CACNA1A-258ENST00000638029 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
CACNA1A-258ENST00000638029 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
CACNA1A-258ENST00000638029 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
CACNA1A-258ENST00000638029 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
CACNA1A-258ENST00000638029 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
CACNA1A-258ENST00000638029 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
CACNA1A-258ENST00000638029 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
CACNA1A-258ENST00000638029 HMCN2Q8NDA2 5059 aa4.16□□□□□ -1.74
CACNA1A-258ENST00000638029 UBR4Q5T4S7 5183 aa4.05□□□□□ -1.76
CACNA1A-258ENST00000638029 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
CACNA1A-258ENST00000638029 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
CACNA1A-258ENST00000638029 MUC2Q02817 5179 aa4.03□□□□□ -1.76
CACNA1A-258ENST00000638029 ABCA13Q86UQ4 5058 aa3.98□□□□□ -1.77
CACNA1A-258ENST00000638029 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
CACNA1A-258ENST00000638029 KRTAP4-4Q9BYR3 166 aa3.93□□□□□ -1.78
CACNA1A-258ENST00000638029 RNF213Q63HN8 5207 aa3.9□□□□□ -1.79
CACNA1A-258ENST00000638029 FAT4Q6V0I7 4981 aa3.88□□□□□ -1.79
CACNA1A-258ENST00000638029 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
CACNA1A-258ENST00000638029 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
CACNA1A-258ENST00000638029 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
CACNA1A-258ENST00000638029 KMT2DO14686 5537 aa3.69□□□□□ -1.82
CACNA1A-258ENST00000638029 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
CACNA1A-258ENST00000638029 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
CACNA1A-258ENST00000638029 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
CACNA1A-258ENST00000638029 NEBP20929 6669 aa3.55□□□□□ -1.84
CACNA1A-258ENST00000638029 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
CACNA1A-258ENST00000638029 KRTAP5-9P26371 169 aa3.34□□□□□ -1.87
CACNA1A-258ENST00000638029 USH2AO75445 5202 aa3.31□□□□□ -1.88
CACNA1A-258ENST00000638029 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
CACNA1A-258ENST00000638029 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
CACNA1A-258ENST00000638029 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
CACNA1A-258ENST00000638029 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
CACNA1A-258ENST00000638029 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.92
CACNA1A-258ENST00000638029 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.92
CACNA1A-258ENST00000638029 PHGR1C9JFL3 82 aa3□□□□□ -1.93
CACNA1A-258ENST00000638029 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.96
CACNA1A-258ENST00000638029 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
CACNA1A-258ENST00000638029 KRTAP5-8O75690 187 aa2.56□□□□□ -2
CACNA1A-258ENST00000638029 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
CACNA1A-258ENST00000638029 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
CACNA1A-258ENST00000638029 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.02
CACNA1A-258ENST00000638029 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
CACNA1A-258ENST00000638029 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
CACNA1A-258ENST00000638029 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
CACNA1A-258ENST00000638029 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
CACNA1A-258ENST00000638029 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
CACNA1A-258ENST00000638029 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
CACNA1A-258ENST00000638029 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
CACNA1A-258ENST00000638029 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
CACNA1A-258ENST00000638029 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
CACNA1A-258ENST00000638029 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms