RNA–Protein interactions for RNA: ENST00000638000.1

ARID1B-235, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-235ENST00000638000 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
ARID1B-235ENST00000638000 MT1BP07438 61 aa3.54□□□□□ -1.84
ARID1B-235ENST00000638000 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
ARID1B-235ENST00000638000 MT1XP80297 61 aa3.47□□□□□ -1.85
ARID1B-235ENST00000638000 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
ARID1B-235ENST00000638000 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
ARID1B-235ENST00000638000 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
ARID1B-235ENST00000638000 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
ARID1B-235ENST00000638000 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
ARID1B-235ENST00000638000 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
ARID1B-235ENST00000638000 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
ARID1B-235ENST00000638000 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
ARID1B-235ENST00000638000 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
ARID1B-235ENST00000638000 MT3P25713 68 aa3.27□□□□□ -1.89
ARID1B-235ENST00000638000 KRTAP19-6Q3LI70 58 aa3.23□□□□□ -1.89
ARID1B-235ENST00000638000 USH2AO75445 5202 aa3.17□□□□□ -1.9
ARID1B-235ENST00000638000 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
ARID1B-235ENST00000638000 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
ARID1B-235ENST00000638000 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
ARID1B-235ENST00000638000 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
ARID1B-235ENST00000638000 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
ARID1B-235ENST00000638000 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
ARID1B-235ENST00000638000 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
ARID1B-235ENST00000638000 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
ARID1B-235ENST00000638000 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
ARID1B-235ENST00000638000 MT1EP04732 61 aa3.03□□□□□ -1.92
ARID1B-235ENST00000638000 MT1LQ93083 61 aa3.01□□□□□ -1.93
ARID1B-235ENST00000638000 KMT2DO14686 5537 aa2.92□□□□□ -1.94
ARID1B-235ENST00000638000 MT1GP13640 62 aa2.92□□□□□ -1.94
ARID1B-235ENST00000638000 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
ARID1B-235ENST00000638000 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
ARID1B-235ENST00000638000 INE1O15225 51 aa2.87□□□□□ -1.95
ARID1B-235ENST00000638000 KRTAP2-3P0C7H8 128 aa2.86□□□□□ -1.95
ARID1B-235ENST00000638000 KRTAP2-4Q9BYR9 128 aa2.86□□□□□ -1.95
ARID1B-235ENST00000638000 KRTAP2-1Q9BYU5 128 aa2.86□□□□□ -1.95
ARID1B-235ENST00000638000 MT1MQ8N339 61 aa2.84□□□□□ -1.96
ARID1B-235ENST00000638000 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
ARID1B-235ENST00000638000 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
ARID1B-235ENST00000638000 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
ARID1B-235ENST00000638000 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
ARID1B-235ENST00000638000 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
ARID1B-235ENST00000638000 MUC12Q9UKN1 5478 aa2.66□□□□□ -1.98
ARID1B-235ENST00000638000 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
ARID1B-235ENST00000638000 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
ARID1B-235ENST00000638000 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
ARID1B-235ENST00000638000 MT1AP04731 61 aa2.58□□□□□ -2
ARID1B-235ENST00000638000 SPRR2EP22531 72 aa2.56□□□□□ -2
ARID1B-235ENST00000638000 SPRR2BP35325 72 aa2.56□□□□□ -2
ARID1B-235ENST00000638000 SPRR2AP35326 72 aa2.56□□□□□ -2
ARID1B-235ENST00000638000 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
ARID1B-235ENST00000638000 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
ARID1B-235ENST00000638000 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
ARID1B-235ENST00000638000 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
ARID1B-235ENST00000638000 SPRR2DP22532 72 aa2.47□□□□□ -2.01
ARID1B-235ENST00000638000 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
ARID1B-235ENST00000638000 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
ARID1B-235ENST00000638000 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
ARID1B-235ENST00000638000 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
ARID1B-235ENST00000638000 NEBP20929 6669 aa2.35□□□□□ -2.03
ARID1B-235ENST00000638000 SYNE1Q8NF91 8797 aaKnown RBP2.27□□□□□ -2.05
ARID1B-235ENST00000638000 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
ARID1B-235ENST00000638000 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
ARID1B-235ENST00000638000 KRTAP20-1Q3LI63 56 aa2.17□□□□□ -2.06
ARID1B-235ENST00000638000 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
ARID1B-235ENST00000638000 MT4P47944 62 aa2.07□□□□□ -2.08
ARID1B-235ENST00000638000 PRM1P04553 51 aa2.03□□□□□ -2.08
ARID1B-235ENST00000638000 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
ARID1B-235ENST00000638000 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
ARID1B-235ENST00000638000 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
ARID1B-235ENST00000638000 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
ARID1B-235ENST00000638000 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
ARID1B-235ENST00000638000 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
ARID1B-235ENST00000638000 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
ARID1B-235ENST00000638000 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
ARID1B-235ENST00000638000 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
ARID1B-235ENST00000638000 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
ARID1B-235ENST00000638000 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
ARID1B-235ENST00000638000 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 55.1 ms