RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
PNKP-229ENST00000637897 SPRR2EP22531 72 aa3.19□□□□□ -1.9
PNKP-229ENST00000637897 SPRR2BP35325 72 aa3.19□□□□□ -1.9
PNKP-229ENST00000637897 SPRR2AP35326 72 aa3.19□□□□□ -1.9
PNKP-229ENST00000637897 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
PNKP-229ENST00000637897 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
PNKP-229ENST00000637897 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
PNKP-229ENST00000637897 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
PNKP-229ENST00000637897 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
PNKP-229ENST00000637897 PRO2289Q9P1D8 64 aa3.15□□□□□ -1.91
PNKP-229ENST00000637897 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
PNKP-229ENST00000637897 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
PNKP-229ENST00000637897 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
PNKP-229ENST00000637897 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
PNKP-229ENST00000637897 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
PNKP-229ENST00000637897 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.92
PNKP-229ENST00000637897 TNP1P09430 55 aa3.08□□□□□ -1.92
PNKP-229ENST00000637897 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
PNKP-229ENST00000637897 SPRR2DP22532 72 aa3.07□□□□□ -1.92
PNKP-229ENST00000637897 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
PNKP-229ENST00000637897 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
PNKP-229ENST00000637897 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
PNKP-229ENST00000637897 KRTAP4-9Q9BYQ8 210 aa3□□□□□ -1.93
PNKP-229ENST00000637897 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
PNKP-229ENST00000637897 MT1EP04732 61 aa2.94□□□□□ -1.94
PNKP-229ENST00000637897 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
PNKP-229ENST00000637897 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
PNKP-229ENST00000637897 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
PNKP-229ENST00000637897 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
PNKP-229ENST00000637897 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
PNKP-229ENST00000637897 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
PNKP-229ENST00000637897 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
PNKP-229ENST00000637897 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
PNKP-229ENST00000637897 MT1GP13640 62 aa2.8□□□□□ -1.96
PNKP-229ENST00000637897 MT1MQ8N339 61 aa2.8□□□□□ -1.96
PNKP-229ENST00000637897 MT1LQ93083 61 aa2.8□□□□□ -1.96
PNKP-229ENST00000637897 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
PNKP-229ENST00000637897 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
PNKP-229ENST00000637897 MT4P47944 62 aa2.74□□□□□ -1.97
PNKP-229ENST00000637897 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
PNKP-229ENST00000637897 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
PNKP-229ENST00000637897 KRTAP4-7Q9BYR0 210 aa2.72□□□□□ -1.97
PNKP-229ENST00000637897 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
PNKP-229ENST00000637897 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
PNKP-229ENST00000637897 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
PNKP-229ENST00000637897 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
PNKP-229ENST00000637897 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
PNKP-229ENST00000637897 LCE3CQ5T5A8 94 aa2.62□□□□□ -1.99
PNKP-229ENST00000637897 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
PNKP-229ENST00000637897 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
PNKP-229ENST00000637897 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
PNKP-229ENST00000637897 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
PNKP-229ENST00000637897 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
PNKP-229ENST00000637897 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
PNKP-229ENST00000637897 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
PNKP-229ENST00000637897 KRTAP6-1Q3LI64 71 aa2.39□□□□□ -2.03
PNKP-229ENST00000637897 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
PNKP-229ENST00000637897 MT1AP04731 61 aa2.36□□□□□ -2.03
PNKP-229ENST00000637897 MT3P25713 68 aa2.35□□□□□ -2.03
PNKP-229ENST00000637897 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
PNKP-229ENST00000637897 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
PNKP-229ENST00000637897 INE1O15225 51 aa2.26□□□□□ -2.05
PNKP-229ENST00000637897 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
PNKP-229ENST00000637897 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
PNKP-229ENST00000637897 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
PNKP-229ENST00000637897 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
PNKP-229ENST00000637897 LCE1EQ5T753 118 aa1.98□□□□□ -2.09
PNKP-229ENST00000637897 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
PNKP-229ENST00000637897 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
PNKP-229ENST00000637897 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
PNKP-229ENST00000637897 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
PNKP-229ENST00000637897 PRM1P04553 51 aa1.72□□□□□ -2.13
PNKP-229ENST00000637897 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
PNKP-229ENST00000637897 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
PNKP-229ENST00000637897 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
PNKP-229ENST00000637897 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
PNKP-229ENST00000637897 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
PNKP-229ENST00000637897 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 270.7 ms