RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
CTSD-211ENST00000637387 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
CTSD-211ENST00000637387 SPRR2EP22531 72 aa5.72□□□□□ -1.49
CTSD-211ENST00000637387 SPRR2BP35325 72 aa5.72□□□□□ -1.49
CTSD-211ENST00000637387 SPRR2AP35326 72 aa5.72□□□□□ -1.49
CTSD-211ENST00000637387 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
CTSD-211ENST00000637387 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
CTSD-211ENST00000637387 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
CTSD-211ENST00000637387 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
CTSD-211ENST00000637387 MT1EP04732 61 aa5.59□□□□□ -1.51
CTSD-211ENST00000637387 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
CTSD-211ENST00000637387 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
CTSD-211ENST00000637387 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
CTSD-211ENST00000637387 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
CTSD-211ENST00000637387 SPRR2DP22532 72 aa5.53□□□□□ -1.52
CTSD-211ENST00000637387 MT1LQ93083 61 aa5.46□□□□□ -1.53
CTSD-211ENST00000637387 LCE3BQ5TA77 95 aa5.4□□□□□ -1.55
CTSD-211ENST00000637387 KRTAP19-3Q7Z4W3 81 aa5.38□□□□□ -1.55
CTSD-211ENST00000637387 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
CTSD-211ENST00000637387 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
CTSD-211ENST00000637387 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
CTSD-211ENST00000637387 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
CTSD-211ENST00000637387 MT1GP13640 62 aa5.29□□□□□ -1.56
CTSD-211ENST00000637387 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
CTSD-211ENST00000637387 MT1MQ8N339 61 aa5.27□□□□□ -1.57
CTSD-211ENST00000637387 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
CTSD-211ENST00000637387 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
CTSD-211ENST00000637387 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
CTSD-211ENST00000637387 GPR98Q8WXG9 6306 aa5.09□□□□□ -1.6
CTSD-211ENST00000637387 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
CTSD-211ENST00000637387 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
CTSD-211ENST00000637387 INE1O15225 51 aa4.94□□□□□ -1.62
CTSD-211ENST00000637387 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
CTSD-211ENST00000637387 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
CTSD-211ENST00000637387 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
CTSD-211ENST00000637387 HMCN1Q96RW7 5635 aa4.85□□□□□ -1.63
CTSD-211ENST00000637387 MT4P47944 62 aa4.83□□□□□ -1.64
CTSD-211ENST00000637387 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
CTSD-211ENST00000637387 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
CTSD-211ENST00000637387 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
CTSD-211ENST00000637387 MT1AP04731 61 aa4.64□□□□□ -1.67
CTSD-211ENST00000637387 KRTAP5-10Q6L8G5 202 aa4.64□□□□□ -1.67
CTSD-211ENST00000637387 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
CTSD-211ENST00000637387 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
CTSD-211ENST00000637387 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
CTSD-211ENST00000637387 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
CTSD-211ENST00000637387 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
CTSD-211ENST00000637387 KRTAP5-7Q6L8G8 165 aa4.47□□□□□ -1.69
CTSD-211ENST00000637387 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
CTSD-211ENST00000637387 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
CTSD-211ENST00000637387 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
CTSD-211ENST00000637387 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
CTSD-211ENST00000637387 MT3P25713 68 aa4.16□□□□□ -1.74
CTSD-211ENST00000637387 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
CTSD-211ENST00000637387 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
CTSD-211ENST00000637387 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
CTSD-211ENST00000637387 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
CTSD-211ENST00000637387 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
CTSD-211ENST00000637387 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
CTSD-211ENST00000637387 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
CTSD-211ENST00000637387 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
CTSD-211ENST00000637387 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
CTSD-211ENST00000637387 LCE1EQ5T753 118 aa3.65□□□□□ -1.82
CTSD-211ENST00000637387 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CTSD-211ENST00000637387 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
CTSD-211ENST00000637387 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
CTSD-211ENST00000637387 PRM1P04553 51 aa3.32□□□□□ -1.88
CTSD-211ENST00000637387 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.89
CTSD-211ENST00000637387 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
CTSD-211ENST00000637387 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
CTSD-211ENST00000637387 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
CTSD-211ENST00000637387 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
CTSD-211ENST00000637387 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
CTSD-211ENST00000637387 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
CTSD-211ENST00000637387 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
CTSD-211ENST00000637387 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
CTSD-211ENST00000637387 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 91.7 ms