RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SPRR2BP35325 72 aa5.83□□□□□ -1.48
CLN6-219ENST00000637329 SPRR2AP35326 72 aa5.83□□□□□ -1.48
CLN6-219ENST00000637329 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
CLN6-219ENST00000637329 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
CLN6-219ENST00000637329 GPR98Q8WXG9 6306 aa5.78□□□□□ -1.48
CLN6-219ENST00000637329 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
CLN6-219ENST00000637329 SPRR2FQ96RM1 72 aa5.76□□□□□ -1.49
CLN6-219ENST00000637329 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
CLN6-219ENST00000637329 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
CLN6-219ENST00000637329 SPRR2DP22532 72 aa5.66□□□□□ -1.5
CLN6-219ENST00000637329 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
CLN6-219ENST00000637329 MT1EP04732 61 aa5.61□□□□□ -1.51
CLN6-219ENST00000637329 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.51
CLN6-219ENST00000637329 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
CLN6-219ENST00000637329 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
CLN6-219ENST00000637329 MT1LQ93083 61 aa5.48□□□□□ -1.53
CLN6-219ENST00000637329 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
CLN6-219ENST00000637329 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
CLN6-219ENST00000637329 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
CLN6-219ENST00000637329 MT1GP13640 62 aa5.36□□□□□ -1.55
CLN6-219ENST00000637329 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
CLN6-219ENST00000637329 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
CLN6-219ENST00000637329 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
CLN6-219ENST00000637329 MT1MQ8N339 61 aa5.28□□□□□ -1.56
CLN6-219ENST00000637329 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
CLN6-219ENST00000637329 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
CLN6-219ENST00000637329 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
CLN6-219ENST00000637329 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
CLN6-219ENST00000637329 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
CLN6-219ENST00000637329 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
CLN6-219ENST00000637329 KRTAP5-10Q6L8G5 202 aa5.05□□□□□ -1.6
CLN6-219ENST00000637329 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
CLN6-219ENST00000637329 MT4P47944 62 aa4.99□□□□□ -1.61
CLN6-219ENST00000637329 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
CLN6-219ENST00000637329 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
CLN6-219ENST00000637329 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
CLN6-219ENST00000637329 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
CLN6-219ENST00000637329 H3BS24 57 aa4.88□□□□□ -1.63
CLN6-219ENST00000637329 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
CLN6-219ENST00000637329 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
CLN6-219ENST00000637329 A0A0A0MQY5 61 aa4.72□□□□□ -1.65
CLN6-219ENST00000637329 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
CLN6-219ENST00000637329 MT1AP04731 61 aa4.68□□□□□ -1.66
CLN6-219ENST00000637329 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
CLN6-219ENST00000637329 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
CLN6-219ENST00000637329 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
CLN6-219ENST00000637329 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
CLN6-219ENST00000637329 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
CLN6-219ENST00000637329 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
CLN6-219ENST00000637329 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
CLN6-219ENST00000637329 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
CLN6-219ENST00000637329 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
CLN6-219ENST00000637329 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
CLN6-219ENST00000637329 MT3P25713 68 aa4.24□□□□□ -1.73
CLN6-219ENST00000637329 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
CLN6-219ENST00000637329 KRTAP5-2Q701N4 177 aa4.18□□□□□ -1.74
CLN6-219ENST00000637329 KRTAP5-8O75690 187 aa4.15□□□□□ -1.75
CLN6-219ENST00000637329 INE1O15225 51 aa4.12□□□□□ -1.75
CLN6-219ENST00000637329 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
CLN6-219ENST00000637329 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
CLN6-219ENST00000637329 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
CLN6-219ENST00000637329 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
CLN6-219ENST00000637329 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
CLN6-219ENST00000637329 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
CLN6-219ENST00000637329 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
CLN6-219ENST00000637329 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
CLN6-219ENST00000637329 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
CLN6-219ENST00000637329 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
CLN6-219ENST00000637329 PRM1P04553 51 aa3.35□□□□□ -1.87
CLN6-219ENST00000637329 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
CLN6-219ENST00000637329 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
CLN6-219ENST00000637329 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
CLN6-219ENST00000637329 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
CLN6-219ENST00000637329 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
CLN6-219ENST00000637329 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
CLN6-219ENST00000637329 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
CLN6-219ENST00000637329 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
CLN6-219ENST00000637329 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms