RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	MT1L	Q93083	61 aa		5.03	□□□□□ -1.6
CACNA1A-238	ENST00000637276	KRTAP9-2	Q9BYQ4	174 aa		5.03	□□□□□ -1.6
CACNA1A-238	ENST00000637276	ABCA13	Q86UQ4	5058 aa		5.01	□□□□□ -1.61
CACNA1A-238	ENST00000637276	EPPK1	P58107	5090 aa	Known RBP	4.99	□□□□□ -1.61
CACNA1A-238	ENST00000637276	MT3	P25713	68 aa		4.99	□□□□□ -1.61
CACNA1A-238	ENST00000637276	KRTAP19-6	Q3LI70	58 aa		4.98	□□□□□ -1.61
CACNA1A-238	ENST00000637276	LCE4A	Q5TA78	99 aa		4.97	□□□□□ -1.61
CACNA1A-238	ENST00000637276	MT1E	P04732	61 aa		4.96	□□□□□ -1.62
CACNA1A-238	ENST00000637276	KRTAP20-1	Q3LI63	56 aa		4.88	□□□□□ -1.63
CACNA1A-238	ENST00000637276	MT1M	Q8N339	61 aa		4.87	□□□□□ -1.63
CACNA1A-238	ENST00000637276	FSIP2	Q5CZC0	6907 aa		4.79	□□□□□ -1.64
CACNA1A-238	ENST00000637276	HERC2	O95714	4834 aa		4.79	□□□□□ -1.64
CACNA1A-238	ENST00000637276	BIRC6	Q9NR09	4857 aa		4.76	□□□□□ -1.65
CACNA1A-238	ENST00000637276	KRTAP9-6	A0A140TA67	174 aa		4.74	□□□□□ -1.65
CACNA1A-238	ENST00000637276	SYNE1	Q8NF91	8797 aa	Known RBP	4.74	□□□□□ -1.65
CACNA1A-238	ENST00000637276	HMCN2	Q8NDA2	5059 aa		4.65	□□□□□ -1.67
CACNA1A-238	ENST00000637276	PCLO	Q9Y6V0	5065 aa		4.64	□□□□□ -1.67
CACNA1A-238	ENST00000637276	MUC17	Q685J3	4493 aa		4.64	□□□□□ -1.67
CACNA1A-238	ENST00000637276	LCE2A	Q5TA79	106 aa	Predicted RBP	4.63	□□□□□ -1.67
CACNA1A-238	ENST00000637276	HERC1	Q15751	4861 aa		4.59	□□□□□ -1.67
CACNA1A-238	ENST00000637276	UBR4	Q5T4S7	5183 aa		4.58	□□□□□ -1.68
CACNA1A-238	ENST00000637276	KRTAP6-2	Q3LI66	62 aa		4.57	□□□□□ -1.68
CACNA1A-238	ENST00000637276	KRTAP9-7	A8MTY7	169 aa		4.55	□□□□□ -1.68
CACNA1A-238	ENST00000637276	KRTAP19-2	Q3LHN2	52 aa		4.55	□□□□□ -1.68
CACNA1A-238	ENST00000637276	RNF213	Q63HN8	5207 aa		4.54	□□□□□ -1.68
CACNA1A-238	ENST00000637276	KRTAP2-3	P0C7H8	128 aa		4.52	□□□□□ -1.69
CACNA1A-238	ENST00000637276	KRTAP2-4	Q9BYR9	128 aa		4.52	□□□□□ -1.69
CACNA1A-238	ENST00000637276	KRTAP2-1	Q9BYU5	128 aa		4.52	□□□□□ -1.69
CACNA1A-238	ENST00000637276	MUC2	Q02817	5179 aa		4.44	□□□□□ -1.7
CACNA1A-238	ENST00000637276	MT1A	P04731	61 aa		4.43	□□□□□ -1.7
CACNA1A-238	ENST00000637276	FAT4	Q6V0I7	4981 aa		4.42	□□□□□ -1.7
CACNA1A-238	ENST00000637276	KRTAP19-7	Q3SYF9	63 aa		4.41	□□□□□ -1.7
CACNA1A-238	ENST00000637276	KRTAP6-1	Q3LI64	71 aa		4.38	□□□□□ -1.71
CACNA1A-238	ENST00000637276	OBSCN	Q5VST9	7968 aa		4.34	□□□□□ -1.71
CACNA1A-238	ENST00000637276	KRTAP20-2	Q3LI61	65 aa		4.31	□□□□□ -1.72
CACNA1A-238	ENST00000637276	KRTAP9-9	Q9BYP9	154 aa		4.23	□□□□□ -1.73
CACNA1A-238	ENST00000637276	KRTAP9-4	Q9BYQ2	154 aa		4.21	□□□□□ -1.74
CACNA1A-238	ENST00000637276	KRTAP9-6	A8MVA2	160 aa		4.16	□□□□□ -1.74
CACNA1A-238	ENST00000637276	KRTAP4-11	Q9BYQ6	195 aa		4.16	□□□□□ -1.74
CACNA1A-238	ENST00000637276	KRTAP4-4	Q9BYR3	166 aa		4.15	□□□□□ -1.74
CACNA1A-238	ENST00000637276	KRTAP4-6	Q9BYQ5	205 aa		4.14	□□□□□ -1.75
CACNA1A-238	ENST00000637276	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.12	□□□□□ -1.75
CACNA1A-238	ENST00000637276	KRTAP2-2	Q9BYT5	123 aa		4.09	□□□□□ -1.75
CACNA1A-238	ENST00000637276	DST	Q03001	7570 aa	Known RBP	4.07	□□□□□ -1.76
CACNA1A-238	ENST00000637276	KRTAP4-12	Q9BQ66	201 aa		4.06	□□□□□ -1.76
CACNA1A-238	ENST00000637276	KRTAP4-2	Q9BYR5	136 aa		4.06	□□□□□ -1.76
CACNA1A-238	ENST00000637276	KRTAP6-3	Q3LI67	103 aa		3.99	□□□□□ -1.77
CACNA1A-238	ENST00000637276	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.97	□□□□□ -1.77
CACNA1A-238	ENST00000637276	USH2A	O75445	5202 aa		3.94	□□□□□ -1.78
CACNA1A-238	ENST00000637276	MACF1	Q9UPN3	7388 aa	Known RBP	3.86	□□□□□ -1.79
CACNA1A-238	ENST00000637276	KMT2D	O14686	5537 aa		3.85	□□□□□ -1.79
CACNA1A-238	ENST00000637276	SSPO	A2VEC9	5147 aa		3.77	□□□□□ -1.81
CACNA1A-238	ENST00000637276	MUC19	Q7Z5P9	8384 aa		3.71	□□□□□ -1.82
CACNA1A-238	ENST00000637276	MUC12	Q9UKN1	5478 aa		3.34	□□□□□ -1.87
CACNA1A-238	ENST00000637276	NEB	P20929	6669 aa		3.3	□□□□□ -1.88
CACNA1A-238	ENST00000637276	KRTAP5-9	P26371	169 aa		3.1	□□□□□ -1.91
CACNA1A-238	ENST00000637276	MDN1	Q9NU22	5596 aa		3.1	□□□□□ -1.91
CACNA1A-238	ENST00000637276	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.07	□□□□□ -1.92
CACNA1A-238	ENST00000637276	PHGR1	C9JFL3	82 aa		2.98	□□□□□ -1.93
CACNA1A-238	ENST00000637276	KRTAP5-4	Q6L8H1	288 aa		2.94	□□□□□ -1.94
CACNA1A-238	ENST00000637276	GPR98	Q8WXG9	6306 aa		2.85	□□□□□ -1.95
CACNA1A-238	ENST00000637276	MUC5AC	P98088	5654 aa		2.81	□□□□□ -1.96
CACNA1A-238	ENST00000637276	KRTAP5-3	Q6L8H2	238 aa		2.67	□□□□□ -1.98
CACNA1A-238	ENST00000637276	KRTAP5-8	O75690	187 aa		2.55	□□□□□ -2
CACNA1A-238	ENST00000637276	HMCN1	Q96RW7	5635 aa		2.51	□□□□□ -2.01
CACNA1A-238	ENST00000637276	KRTAP5-2	Q701N4	177 aa		2.44	□□□□□ -2.02
CACNA1A-238	ENST00000637276	KRTAP5-10	Q6L8G5	202 aa		2.34	□□□□□ -2.03
CACNA1A-238	ENST00000637276	KRTAP5-1	Q6L8H4	278 aa		2.19	□□□□□ -2.06
CACNA1A-238	ENST00000637276	AHNAK2	Q8IVF2	5795 aa		2.14	□□□□□ -2.07
CACNA1A-238	ENST00000637276	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.12	□□□□□ -2.07
CACNA1A-238	ENST00000637276	KRTAP21-1	Q3LI58	79 aa		1.98	□□□□□ -2.09
CACNA1A-238	ENST00000637276	AHNAK	Q09666	5890 aa	Known RBP	1.97	□□□□□ -2.09
CACNA1A-238	ENST00000637276	KRTAP5-11	Q6L8G4	156 aa		1.93	□□□□□ -2.1
CACNA1A-238	ENST00000637276	KRTAP21-2	Q3LI59	83 aa		1.92	□□□□□ -2.1
CACNA1A-238	ENST00000637276	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	1.85	□□□□□ -2.11
CACNA1A-238	ENST00000637276	KRTAP5-7	Q6L8G8	165 aa		1.79	□□□□□ -2.12
CACNA1A-238	ENST00000637276	MUC16	Q8WXI7	14507 aa		1.72	□□□□□ -2.13

Retrieved 77 of 20,778 RNA–protein pairs in 8.4 ms