RNA–Protein interactions for RNA: ENST00000636958.1

ARID1A-215, Transcript of AT-rich interaction domain 1A, human

TSL 5

Gene ARID1A, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-215	ENST00000636958	KRTAP4-9	Q9BYQ8	210 aa		5.72	□□□□□ -1.49
ARID1A-215	ENST00000636958	MUC12	Q9UKN1	5478 aa		5.68	□□□□□ -1.5
ARID1A-215	ENST00000636958	KRTAP25-1	Q3LHN0	102 aa		5.6	□□□□□ -1.51
ARID1A-215	ENST00000636958	LCE3A	Q5TA76	89 aa		5.59	□□□□□ -1.51
ARID1A-215	ENST00000636958	KRTAP4-2	Q9BYR5	136 aa		5.59	□□□□□ -1.51
ARID1A-215	ENST00000636958	SPRR2E	P22531	72 aa		5.56	□□□□□ -1.52
ARID1A-215	ENST00000636958	SPRR2B	P35325	72 aa		5.56	□□□□□ -1.52
ARID1A-215	ENST00000636958	SPRR2A	P35326	72 aa		5.56	□□□□□ -1.52
ARID1A-215	ENST00000636958	KRTAP19-7	Q3SYF9	63 aa		5.56	□□□□□ -1.52
ARID1A-215	ENST00000636958	MDN1	Q9NU22	5596 aa		5.55	□□□□□ -1.52
ARID1A-215	ENST00000636958	ROMO1	P60602	79 aa		5.54	□□□□□ -1.52
ARID1A-215	ENST00000636958	LCE1A	Q5T7P2	110 aa		5.54	□□□□□ -1.52
ARID1A-215	ENST00000636958	KRTAP19-5	Q3LI72	72 aa		5.53	□□□□□ -1.52
ARID1A-215	ENST00000636958	NEB	P20929	6669 aa		5.52	□□□□□ -1.53
ARID1A-215	ENST00000636958	KRTAP4-11	Q9BYQ6	195 aa		5.51	□□□□□ -1.53
ARID1A-215	ENST00000636958	MT1E	P04732	61 aa		5.5	□□□□□ -1.53
ARID1A-215	ENST00000636958	PMAIP1	Q13794	54 aa		5.47	□□□□□ -1.53
ARID1A-215	ENST00000636958	LCE5A	Q5TCM9	118 aa		5.42	□□□□□ -1.54
ARID1A-215	ENST00000636958	KRTAP19-3	Q7Z4W3	81 aa		5.39	□□□□□ -1.55
ARID1A-215	ENST00000636958	KRTAP12-3	P60328	96 aa		5.38	□□□□□ -1.55
ARID1A-215	ENST00000636958	SPRR2D	P22532	72 aa		5.37	□□□□□ -1.55
ARID1A-215	ENST00000636958	PRAC1	Q96KF2	57 aa		5.37	□□□□□ -1.55
ARID1A-215	ENST00000636958	KTN1-AS1	Q86SY8	53 aa		5.34	□□□□□ -1.55
ARID1A-215	ENST00000636958	KRTAP20-1	Q3LI63	56 aa		5.32	□□□□□ -1.56
ARID1A-215	ENST00000636958	MT1L	Q93083	61 aa		5.32	□□□□□ -1.56
ARID1A-215	ENST00000636958	MT1G	P13640	62 aa		5.3	□□□□□ -1.56
ARID1A-215	ENST00000636958	PP632	Q6XCG6	107 aa		5.3	□□□□□ -1.56
ARID1A-215	ENST00000636958	KRTAP2-3	P0C7H8	128 aa		5.28	□□□□□ -1.56
ARID1A-215	ENST00000636958	KRTAP2-4	Q9BYR9	128 aa		5.28	□□□□□ -1.56
ARID1A-215	ENST00000636958	MT1M	Q8N339	61 aa		5.21	□□□□□ -1.58
ARID1A-215	ENST00000636958	KRTAP2-2	Q9BYT5	123 aa		5.14	□□□□□ -1.59
ARID1A-215	ENST00000636958	KRTAP2-1	Q9BYU5	128 aa		5.14	□□□□□ -1.59
ARID1A-215	ENST00000636958	DST	Q03001	7570 aa	Known RBP	5.08	□□□□□ -1.6
ARID1A-215	ENST00000636958	KRTAP4-3	Q9BYR4	195 aa		5.07	□□□□□ -1.6
ARID1A-215	ENST00000636958	LCE3C	Q5T5A8	94 aa		4.99	□□□□□ -1.61
ARID1A-215	ENST00000636958	KRTAP5-3	Q6L8H2	238 aa		4.97	□□□□□ -1.61
ARID1A-215	ENST00000636958	NDUFAF8	A1L188	74 aa		4.93	□□□□□ -1.62
ARID1A-215	ENST00000636958	KRTAP5-4	Q6L8H1	288 aa		4.75	□□□□□ -1.65
ARID1A-215	ENST00000636958	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.74	□□□□□ -1.65
ARID1A-215	ENST00000636958	MT3	P25713	68 aa		4.72	□□□□□ -1.65
ARID1A-215	ENST00000636958	KRTAP9-6	A8MVA2	160 aa		4.68	□□□□□ -1.66
ARID1A-215	ENST00000636958	MT4	P47944	62 aa		4.67	□□□□□ -1.66
ARID1A-215	ENST00000636958	MT1A	P04731	61 aa		4.53	□□□□□ -1.68
ARID1A-215	ENST00000636958	KRTAP12-4	P60329	112 aa		4.53	□□□□□ -1.68
ARID1A-215	ENST00000636958	HMCN1	Q96RW7	5635 aa		4.53	□□□□□ -1.68
ARID1A-215	ENST00000636958	SYNE1	Q8NF91	8797 aa	Known RBP	4.52	□□□□□ -1.69
ARID1A-215	ENST00000636958	SPRR5	A0A1B0GTR4	108 aa		4.49	□□□□□ -1.69
ARID1A-215	ENST00000636958	KRTAP6-1	Q3LI64	71 aa		4.49	□□□□□ -1.69
ARID1A-215	ENST00000636958	KRTAP20-2	Q3LI61	65 aa		4.46	□□□□□ -1.7
ARID1A-215	ENST00000636958	LCE1F	Q5T754	118 aa		4.29	□□□□□ -1.72
ARID1A-215	ENST00000636958	KRTAP5-2	Q701N4	177 aa		4.22	□□□□□ -1.73
ARID1A-215	ENST00000636958	KRTAP6-2	Q3LI66	62 aa		4.21	□□□□□ -1.74
ARID1A-215	ENST00000636958	LUZP6	Q538Z0	58 aa		4.2	□□□□□ -1.74
ARID1A-215	ENST00000636958	AHNAK2	Q8IVF2	5795 aa		4.19	□□□□□ -1.74
ARID1A-215	ENST00000636958	KRTAP5-10	Q6L8G5	202 aa		4.14	□□□□□ -1.75
ARID1A-215	ENST00000636958	GPR98	Q8WXG9	6306 aa		4.09	□□□□□ -1.75
ARID1A-215	ENST00000636958	KRTAP5-7	Q6L8G8	165 aa		3.92	□□□□□ -1.78
ARID1A-215	ENST00000636958	OBSCN	Q5VST9	7968 aa		3.9	□□□□□ -1.79
ARID1A-215	ENST00000636958	KRTAP5-8	O75690	187 aa		3.84	□□□□□ -1.79
ARID1A-215	ENST00000636958	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.77	□□□□□ -1.81
ARID1A-215	ENST00000636958	KRTAP5-1	Q6L8H4	278 aa		3.72	□□□□□ -1.81
ARID1A-215	ENST00000636958	LCE1E	Q5T753	118 aa		3.7	□□□□□ -1.82
ARID1A-215	ENST00000636958	KRTAP5-11	Q6L8G4	156 aa		3.7	□□□□□ -1.82
ARID1A-215	ENST00000636958	LCE3D	Q9BYE3	92 aa		3.67	□□□□□ -1.82
ARID1A-215	ENST00000636958	LCE3E	Q5T5B0	92 aa		3.64	□□□□□ -1.83
ARID1A-215	ENST00000636958	MUC5AC	P98088	5654 aa		3.55	□□□□□ -1.84
ARID1A-215	ENST00000636958	INE1	O15225	51 aa		3.54	□□□□□ -1.84
ARID1A-215	ENST00000636958	LCE1B	Q5T7P3	118 aa		3.46	□□□□□ -1.86
ARID1A-215	ENST00000636958	LCE1C	Q5T751	118 aa		3.44	□□□□□ -1.86
ARID1A-215	ENST00000636958	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.41	□□□□□ -1.86
ARID1A-215	ENST00000636958	AHNAK	Q09666	5890 aa	Known RBP	3.27	□□□□□ -1.89
ARID1A-215	ENST00000636958	KRTAP4-4	Q9BYR3	166 aa		3.11	□□□□□ -1.91
ARID1A-215	ENST00000636958	KRTAP21-2	Q3LI59	83 aa		2.95	□□□□□ -1.94
ARID1A-215	ENST00000636958	PRM1	P04553	51 aa		2.86	□□□□□ -1.95
ARID1A-215	ENST00000636958	PHGR1	C9JFL3	82 aa		2.64	□□□□□ -1.99
ARID1A-215	ENST00000636958	MUC19	Q7Z5P9	8384 aa		2.36	□□□□□ -2.03
ARID1A-215	ENST00000636958	KRTAP21-1	Q3LI58	79 aa		1.81	□□□□□ -2.12
ARID1A-215	ENST00000636958	MUC16	Q8WXI7	14507 aa		1.72	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 406.1 ms