RNA–Protein interactions for RNA: ENST00000636940.1

ARID1B-221, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 5,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-221ENST00000636940 MT3P25713 68 aa3.27□□□□□ -1.89
ARID1B-221ENST00000636940 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
ARID1B-221ENST00000636940 EPPK1P58107 5090 aaKnown RBP3.25□□□□□ -1.89
ARID1B-221ENST00000636940 KMT2CQ8NEZ4 4911 aaKnown RBP3.23□□□□□ -1.89
ARID1B-221ENST00000636940 MT1LQ93083 61 aa3.23□□□□□ -1.89
ARID1B-221ENST00000636940 MT1EP04732 61 aa3.21□□□□□ -1.9
ARID1B-221ENST00000636940 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.9
ARID1B-221ENST00000636940 FSIP2Q5CZC0 6907 aa3.21□□□□□ -1.9
ARID1B-221ENST00000636940 LCE2AQ5TA79 106 aaPredicted RBP3.2□□□□□ -1.9
ARID1B-221ENST00000636940 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
ARID1B-221ENST00000636940 FLGP20930 4061 aaPredicted RBP3.16□□□□□ -1.9
ARID1B-221ENST00000636940 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
ARID1B-221ENST00000636940 MT1MQ8N339 61 aa3.14□□□□□ -1.91
ARID1B-221ENST00000636940 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
ARID1B-221ENST00000636940 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
ARID1B-221ENST00000636940 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
ARID1B-221ENST00000636940 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
ARID1B-221ENST00000636940 ABCA13Q86UQ4 5058 aa3.11□□□□□ -1.91
ARID1B-221ENST00000636940 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
ARID1B-221ENST00000636940 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
ARID1B-221ENST00000636940 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
ARID1B-221ENST00000636940 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
ARID1B-221ENST00000636940 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
ARID1B-221ENST00000636940 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
ARID1B-221ENST00000636940 PRM1P04553 51 aa3.04□□□□□ -1.92
ARID1B-221ENST00000636940 FAT4Q6V0I7 4981 aa3.01□□□□□ -1.93
ARID1B-221ENST00000636940 UBR4Q5T4S7 5183 aa2.99□□□□□ -1.93
ARID1B-221ENST00000636940 MUC2Q02817 5179 aa2.97□□□□□ -1.93
ARID1B-221ENST00000636940 RNF213Q63HN8 5207 aa2.96□□□□□ -1.94
ARID1B-221ENST00000636940 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
ARID1B-221ENST00000636940 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
ARID1B-221ENST00000636940 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
ARID1B-221ENST00000636940 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
ARID1B-221ENST00000636940 MT1AP04731 61 aa2.89□□□□□ -1.95
ARID1B-221ENST00000636940 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
ARID1B-221ENST00000636940 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
ARID1B-221ENST00000636940 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
ARID1B-221ENST00000636940 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
ARID1B-221ENST00000636940 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
ARID1B-221ENST00000636940 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
ARID1B-221ENST00000636940 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
ARID1B-221ENST00000636940 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
ARID1B-221ENST00000636940 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
ARID1B-221ENST00000636940 USH2AO75445 5202 aa2.58□□□□□ -2
ARID1B-221ENST00000636940 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
ARID1B-221ENST00000636940 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
ARID1B-221ENST00000636940 NEBP20929 6669 aa2.55□□□□□ -2
ARID1B-221ENST00000636940 KMT2DO14686 5537 aa2.53□□□□□ -2.01
ARID1B-221ENST00000636940 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
ARID1B-221ENST00000636940 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
ARID1B-221ENST00000636940 SSPOA2VEC9 5147 aa2.42□□□□□ -2.02
ARID1B-221ENST00000636940 KRTAP4-6Q9BYQ5 205 aa2.39□□□□□ -2.03
ARID1B-221ENST00000636940 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
ARID1B-221ENST00000636940 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
ARID1B-221ENST00000636940 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
ARID1B-221ENST00000636940 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
ARID1B-221ENST00000636940 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
ARID1B-221ENST00000636940 MUC12Q9UKN1 5478 aa2.27□□□□□ -2.05
ARID1B-221ENST00000636940 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
ARID1B-221ENST00000636940 MDN1Q9NU22 5596 aa2.24□□□□□ -2.05
ARID1B-221ENST00000636940 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
ARID1B-221ENST00000636940 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
ARID1B-221ENST00000636940 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
ARID1B-221ENST00000636940 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
ARID1B-221ENST00000636940 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
ARID1B-221ENST00000636940 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
ARID1B-221ENST00000636940 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
ARID1B-221ENST00000636940 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
ARID1B-221ENST00000636940 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
ARID1B-221ENST00000636940 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
ARID1B-221ENST00000636940 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
ARID1B-221ENST00000636940 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
ARID1B-221ENST00000636940 KRTAP5-1Q6L8H4 278 aa1.45□□□□□ -2.18
ARID1B-221ENST00000636940 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
ARID1B-221ENST00000636940 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
ARID1B-221ENST00000636940 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
ARID1B-221ENST00000636940 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
ARID1B-221ENST00000636940 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 71.9 ms