RNA–Protein interactions for RNA: ENST00000636891.1

CPT2-208, Transcript of carnitine palmitoyltransferase 2, human

TSL 5 BASIC

Gene CPT2, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPT2-208	ENST00000636891	CRCT1	Q9UGL9	99 aa		6.06	□□□□□ -1.44
CPT2-208	ENST00000636891	MACF1	Q9UPN3	7388 aa	Known RBP	6.06	□□□□□ -1.44
CPT2-208	ENST00000636891	KRTAP2-3	P0C7H8	128 aa		6.03	□□□□□ -1.44
CPT2-208	ENST00000636891	KRTAP2-4	Q9BYR9	128 aa		6.03	□□□□□ -1.44
CPT2-208	ENST00000636891	KRTAP2-1	Q9BYU5	128 aa		6.03	□□□□□ -1.44
CPT2-208	ENST00000636891	KRTAP4-3	Q9BYR4	195 aa		5.97	□□□□□ -1.45
CPT2-208	ENST00000636891	LOC100996750	A0A140TA64	210 aa		5.92	□□□□□ -1.46
CPT2-208	ENST00000636891	SYNE2	Q8WXH0	6885 aa	Known RBP	5.92	□□□□□ -1.46
CPT2-208	ENST00000636891	DST	Q03001	7570 aa	Known RBP	5.85	□□□□□ -1.47
CPT2-208	ENST00000636891	MT1G	P13640	62 aa		5.82	□□□□□ -1.48
CPT2-208	ENST00000636891	SPRR2F	Q96RM1	72 aa		5.81	□□□□□ -1.48
CPT2-208	ENST00000636891	KRTAP19-4	Q3LI73	84 aa		5.8	□□□□□ -1.48
CPT2-208	ENST00000636891	MT1M	Q8N339	61 aa		5.76	□□□□□ -1.49
CPT2-208	ENST00000636891	KRTAP19-3	Q7Z4W3	81 aa		5.76	□□□□□ -1.49
CPT2-208	ENST00000636891	KRTAP5-9	P26371	169 aa		5.7	□□□□□ -1.5
CPT2-208	ENST00000636891	KRTAP9-6	A0A140TA67	174 aa		5.69	□□□□□ -1.5
CPT2-208	ENST00000636891	MDN1	Q9NU22	5596 aa		5.68	□□□□□ -1.5
CPT2-208	ENST00000636891	LCE5A	Q5TCM9	118 aa		5.66	□□□□□ -1.5
CPT2-208	ENST00000636891	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.63	□□□□□ -1.51
CPT2-208	ENST00000636891	LCE1A	Q5T7P2	110 aa		5.56	□□□□□ -1.52
CPT2-208	ENST00000636891	KRTAP12-4	P60329	112 aa		5.54	□□□□□ -1.52
CPT2-208	ENST00000636891	KRTAP6-3	Q3LI67	103 aa		5.49	□□□□□ -1.53
CPT2-208	ENST00000636891	SPRR2E	P22531	72 aa		5.46	□□□□□ -1.54
CPT2-208	ENST00000636891	SPRR2B	P35325	72 aa		5.46	□□□□□ -1.54
CPT2-208	ENST00000636891	SPRR2A	P35326	72 aa		5.46	□□□□□ -1.54
CPT2-208	ENST00000636891	SYNE1	Q8NF91	8797 aa	Known RBP	5.43	□□□□□ -1.54
CPT2-208	ENST00000636891	LCE3B	Q5TA77	95 aa		5.36	□□□□□ -1.55
CPT2-208	ENST00000636891	KRTAP4-9	Q9BYQ8	210 aa		5.32	□□□□□ -1.56
CPT2-208	ENST00000636891	KRTAP6-1	Q3LI64	71 aa		5.27	□□□□□ -1.57
CPT2-208	ENST00000636891	KRTAP9-7	A8MTY7	169 aa		5.25	□□□□□ -1.57
CPT2-208	ENST00000636891	SPRR2D	P22532	72 aa		5.24	□□□□□ -1.57
CPT2-208	ENST00000636891	NEB	P20929	6669 aa		5.21	□□□□□ -1.58
CPT2-208	ENST00000636891	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.14	□□□□□ -1.59
CPT2-208	ENST00000636891	MT1A	P04731	61 aa		5.1	□□□□□ -1.59
CPT2-208	ENST00000636891	OBSCN	Q5VST9	7968 aa		5	□□□□□ -1.61
CPT2-208	ENST00000636891	KRTAP2-2	Q9BYT5	123 aa		4.96	□□□□□ -1.61
CPT2-208	ENST00000636891	PRM1	P04553	51 aa		4.95	□□□□□ -1.62
CPT2-208	ENST00000636891	LCE3D	Q9BYE3	92 aa		4.95	□□□□□ -1.62
CPT2-208	ENST00000636891	LCE3E	Q5T5B0	92 aa		4.89	□□□□□ -1.63
CPT2-208	ENST00000636891	KRTAP9-4	Q9BYQ2	154 aa		4.83	□□□□□ -1.64
CPT2-208	ENST00000636891	KRTAP5-4	Q6L8H1	288 aa		4.81	□□□□□ -1.64
CPT2-208	ENST00000636891	KRTAP6-2	Q3LI66	62 aa		4.74	□□□□□ -1.65
CPT2-208	ENST00000636891	KRTAP4-6	Q9BYQ5	205 aa		4.63	□□□□□ -1.67
CPT2-208	ENST00000636891	KRTAP20-1	Q3LI63	56 aa		4.63	□□□□□ -1.67
CPT2-208	ENST00000636891	LCE1E	Q5T753	118 aa		4.62	□□□□□ -1.67
CPT2-208	ENST00000636891	MT4	P47944	62 aa		4.61	□□□□□ -1.67
CPT2-208	ENST00000636891	LCE4A	Q5TA78	99 aa		4.59	□□□□□ -1.67
CPT2-208	ENST00000636891	MT3	P25713	68 aa		4.58	□□□□□ -1.68
CPT2-208	ENST00000636891	HMCN1	Q96RW7	5635 aa		4.52	□□□□□ -1.69
CPT2-208	ENST00000636891	LCE1D	Q5T752	114 aa		4.5	□□□□□ -1.69
CPT2-208	ENST00000636891	KRTAP20-2	Q3LI61	65 aa		4.49	□□□□□ -1.69
CPT2-208	ENST00000636891	KRTAP5-2	Q701N4	177 aa		4.39	□□□□□ -1.71
CPT2-208	ENST00000636891	KRTAP5-3	Q6L8H2	238 aa		4.34	□□□□□ -1.71
CPT2-208	ENST00000636891	MUC5AC	P98088	5654 aa		4.03	□□□□□ -1.76
CPT2-208	ENST00000636891	LCE1F	Q5T754	118 aa		3.95	□□□□□ -1.78
CPT2-208	ENST00000636891	AHNAK2	Q8IVF2	5795 aa		3.89	□□□□□ -1.79
CPT2-208	ENST00000636891	KRTAP4-11	Q9BYQ6	195 aa		3.85	□□□□□ -1.79
CPT2-208	ENST00000636891	LCE1B	Q5T7P3	118 aa		3.83	□□□□□ -1.8
CPT2-208	ENST00000636891	KRTAP5-1	Q6L8H4	278 aa		3.8	□□□□□ -1.8
CPT2-208	ENST00000636891	KRTAP5-8	O75690	187 aa		3.73	□□□□□ -1.81
CPT2-208	ENST00000636891	KRTAP5-10	Q6L8G5	202 aa		3.71	□□□□□ -1.82
CPT2-208	ENST00000636891	KRTAP4-2	Q9BYR5	136 aa		3.69	□□□□□ -1.82
CPT2-208	ENST00000636891	LCE1C	Q5T751	118 aa		3.63	□□□□□ -1.83
CPT2-208	ENST00000636891	KRTAP5-7	Q6L8G8	165 aa		3.59	□□□□□ -1.83
CPT2-208	ENST00000636891	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.41	□□□□□ -1.86
CPT2-208	ENST00000636891	GPR98	Q8WXG9	6306 aa		3.4	□□□□□ -1.86
CPT2-208	ENST00000636891	KRTAP21-2	Q3LI59	83 aa		3.37	□□□□□ -1.87
CPT2-208	ENST00000636891	MUC19	Q7Z5P9	8384 aa		3.32	□□□□□ -1.88
CPT2-208	ENST00000636891	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.28	□□□□□ -1.88
CPT2-208	ENST00000636891	KRTAP9-9	Q9BYP9	154 aa		3.24	□□□□□ -1.89
CPT2-208	ENST00000636891	KRTAP4-4	Q9BYR3	166 aa		3.22	□□□□□ -1.89
CPT2-208	ENST00000636891	KRTAP5-11	Q6L8G4	156 aa		3.19	□□□□□ -1.9
CPT2-208	ENST00000636891	KRTAP21-1	Q3LI58	79 aa		3.12	□□□□□ -1.91
CPT2-208	ENST00000636891	KRTAP4-12	Q9BQ66	201 aa		3.07	□□□□□ -1.92
CPT2-208	ENST00000636891	AHNAK	Q09666	5890 aa	Known RBP	2.82	□□□□□ -1.96
CPT2-208	ENST00000636891	PHGR1	C9JFL3	82 aa		2.76	□□□□□ -1.97
CPT2-208	ENST00000636891	MUC16	Q8WXI7	14507 aa		1.78	□□□□□ -2.12

Retrieved 77 of 20,778 RNA–protein pairs in 88.5 ms