RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
CHD2-226ENST00000636881 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
CHD2-226ENST00000636881 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
CHD2-226ENST00000636881 MT1LQ93083 61 aa2.85□□□□□ -1.95
CHD2-226ENST00000636881 MT1EP04732 61 aa2.82□□□□□ -1.96
CHD2-226ENST00000636881 USH2AO75445 5202 aa2.79□□□□□ -1.96
CHD2-226ENST00000636881 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
CHD2-226ENST00000636881 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.73□□□□□ -1.97
CHD2-226ENST00000636881 KRTAP9-2Q9BYQ4 174 aa2.72□□□□□ -1.97
CHD2-226ENST00000636881 CRCT1Q9UGL9 99 aa2.72□□□□□ -1.97
CHD2-226ENST00000636881 MT1GP13640 62 aa2.72□□□□□ -1.97
CHD2-226ENST00000636881 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
CHD2-226ENST00000636881 LCE3BQ5TA77 95 aa2.71□□□□□ -1.98
CHD2-226ENST00000636881 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
CHD2-226ENST00000636881 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
CHD2-226ENST00000636881 MT1MQ8N339 61 aa2.63□□□□□ -1.99
CHD2-226ENST00000636881 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
CHD2-226ENST00000636881 SSPOA2VEC9 5147 aa2.57□□□□□ -2
CHD2-226ENST00000636881 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
CHD2-226ENST00000636881 KRTAP19-6Q3LI70 58 aa2.54□□□□□ -2
CHD2-226ENST00000636881 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2.01
CHD2-226ENST00000636881 MT1AP04731 61 aa2.49□□□□□ -2.01
CHD2-226ENST00000636881 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
CHD2-226ENST00000636881 MUC12Q9UKN1 5478 aa2.49□□□□□ -2.01
CHD2-226ENST00000636881 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
CHD2-226ENST00000636881 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
CHD2-226ENST00000636881 PRM1P04553 51 aa2.47□□□□□ -2.01
CHD2-226ENST00000636881 LCE1DQ5T752 114 aa2.47□□□□□ -2.01
CHD2-226ENST00000636881 FSIP2Q5CZC0 6907 aa2.47□□□□□ -2.01
CHD2-226ENST00000636881 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
CHD2-226ENST00000636881 KRTAP6-1Q3LI64 71 aa2.43□□□□□ -2.02
CHD2-226ENST00000636881 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
CHD2-226ENST00000636881 LCE1AQ5T7P2 110 aa2.43□□□□□ -2.02
CHD2-226ENST00000636881 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
CHD2-226ENST00000636881 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
CHD2-226ENST00000636881 KRTAP4-2Q9BYR5 136 aa2.32□□□□□ -2.04
CHD2-226ENST00000636881 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
CHD2-226ENST00000636881 KRTAP4-11Q9BYQ6 195 aa2.3□□□□□ -2.04
CHD2-226ENST00000636881 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
CHD2-226ENST00000636881 SYNE2Q8WXH0 6885 aaKnown RBP2.24□□□□□ -2.05
CHD2-226ENST00000636881 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
CHD2-226ENST00000636881 MACF1Q9UPN3 7388 aaKnown RBP2.17□□□□□ -2.06
CHD2-226ENST00000636881 MT3P25713 68 aa2.16□□□□□ -2.06
CHD2-226ENST00000636881 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.07
CHD2-226ENST00000636881 SPRR2EP22531 72 aa2.14□□□□□ -2.07
CHD2-226ENST00000636881 SPRR2BP35325 72 aa2.14□□□□□ -2.07
CHD2-226ENST00000636881 SPRR2AP35326 72 aa2.14□□□□□ -2.07
CHD2-226ENST00000636881 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
CHD2-226ENST00000636881 NEBP20929 6669 aa2.08□□□□□ -2.08
CHD2-226ENST00000636881 KRTAP5-9P26371 169 aa2.07□□□□□ -2.08
CHD2-226ENST00000636881 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
CHD2-226ENST00000636881 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
CHD2-226ENST00000636881 SPRR2DP22532 72 aa2.04□□□□□ -2.08
CHD2-226ENST00000636881 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
CHD2-226ENST00000636881 LCE1EQ5T753 118 aa2□□□□□ -2.09
CHD2-226ENST00000636881 KRTAP5-4Q6L8H1 288 aa1.86□□□□□ -2.11
CHD2-226ENST00000636881 MT4P47944 62 aa1.83□□□□□ -2.12
CHD2-226ENST00000636881 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
CHD2-226ENST00000636881 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
CHD2-226ENST00000636881 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.13
CHD2-226ENST00000636881 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.13
CHD2-226ENST00000636881 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
CHD2-226ENST00000636881 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
CHD2-226ENST00000636881 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
CHD2-226ENST00000636881 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
CHD2-226ENST00000636881 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
CHD2-226ENST00000636881 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
CHD2-226ENST00000636881 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
CHD2-226ENST00000636881 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
CHD2-226ENST00000636881 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
CHD2-226ENST00000636881 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
CHD2-226ENST00000636881 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
CHD2-226ENST00000636881 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
CHD2-226ENST00000636881 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
CHD2-226ENST00000636881 KRTAP4-4Q9BYR3 166 aa1.47□□□□□ -2.17
CHD2-226ENST00000636881 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
CHD2-226ENST00000636881 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
CHD2-226ENST00000636881 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 245 ms