RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 KRTAP19-3Q7Z4W3 81 aa6.25□□□□□ -1.41
LIN28B-202ENST00000635857 A6NED7 52 aa6.24□□□□□ -1.41
LIN28B-202ENST00000635857 LCE3AQ5TA76 89 aa6.24□□□□□ -1.41
LIN28B-202ENST00000635857 RPS28P62857 69 aaKnown RBP6.21□□□□□ -1.42
LIN28B-202ENST00000635857 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
LIN28B-202ENST00000635857 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
LIN28B-202ENST00000635857 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
LIN28B-202ENST00000635857 MT1GP13640 62 aa6.13□□□□□ -1.43
LIN28B-202ENST00000635857 MT1LQ93083 61 aa6.06□□□□□ -1.44
LIN28B-202ENST00000635857 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
LIN28B-202ENST00000635857 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
LIN28B-202ENST00000635857 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
LIN28B-202ENST00000635857 MT1MQ8N339 61 aa6□□□□□ -1.45
LIN28B-202ENST00000635857 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
LIN28B-202ENST00000635857 ROMO1P60602 79 aa5.88□□□□□ -1.47
LIN28B-202ENST00000635857 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
LIN28B-202ENST00000635857 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
LIN28B-202ENST00000635857 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
LIN28B-202ENST00000635857 KRTAP4-3Q9BYR4 195 aa5.81□□□□□ -1.48
LIN28B-202ENST00000635857 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
LIN28B-202ENST00000635857 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
LIN28B-202ENST00000635857 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
LIN28B-202ENST00000635857 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
LIN28B-202ENST00000635857 MT4P47944 62 aa5.63□□□□□ -1.51
LIN28B-202ENST00000635857 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
LIN28B-202ENST00000635857 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
LIN28B-202ENST00000635857 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
LIN28B-202ENST00000635857 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
LIN28B-202ENST00000635857 HMCN1Q96RW7 5635 aa5.51□□□□□ -1.53
LIN28B-202ENST00000635857 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.54
LIN28B-202ENST00000635857 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
LIN28B-202ENST00000635857 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
LIN28B-202ENST00000635857 PRAC1Q96KF2 57 aa5.42□□□□□ -1.54
LIN28B-202ENST00000635857 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
LIN28B-202ENST00000635857 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
LIN28B-202ENST00000635857 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
LIN28B-202ENST00000635857 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
LIN28B-202ENST00000635857 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
LIN28B-202ENST00000635857 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
LIN28B-202ENST00000635857 MT1AP04731 61 aa5.18□□□□□ -1.58
LIN28B-202ENST00000635857 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
LIN28B-202ENST00000635857 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
LIN28B-202ENST00000635857 KRTAP6-1Q3LI64 71 aa5.11□□□□□ -1.59
LIN28B-202ENST00000635857 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
LIN28B-202ENST00000635857 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
LIN28B-202ENST00000635857 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
LIN28B-202ENST00000635857 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
LIN28B-202ENST00000635857 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
LIN28B-202ENST00000635857 KRTAP5-7Q6L8G8 165 aa4.9□□□□□ -1.63
LIN28B-202ENST00000635857 KRTAP6-2Q3LI66 62 aa4.86□□□□□ -1.63
LIN28B-202ENST00000635857 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
LIN28B-202ENST00000635857 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
LIN28B-202ENST00000635857 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
LIN28B-202ENST00000635857 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
LIN28B-202ENST00000635857 MT3P25713 68 aa4.77□□□□□ -1.65
LIN28B-202ENST00000635857 KRTAP5-8O75690 187 aa4.58□□□□□ -1.68
LIN28B-202ENST00000635857 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
LIN28B-202ENST00000635857 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
LIN28B-202ENST00000635857 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
LIN28B-202ENST00000635857 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
LIN28B-202ENST00000635857 MUC5BQ9HC84 5762 aaPredicted RBP4.28□□□□□ -1.72
LIN28B-202ENST00000635857 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
LIN28B-202ENST00000635857 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
LIN28B-202ENST00000635857 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
LIN28B-202ENST00000635857 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
LIN28B-202ENST00000635857 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
LIN28B-202ENST00000635857 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
LIN28B-202ENST00000635857 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
LIN28B-202ENST00000635857 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
LIN28B-202ENST00000635857 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
LIN28B-202ENST00000635857 INE1O15225 51 aa3.57□□□□□ -1.84
LIN28B-202ENST00000635857 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
LIN28B-202ENST00000635857 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
LIN28B-202ENST00000635857 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
LIN28B-202ENST00000635857 PRM1P04553 51 aa3□□□□□ -1.93
LIN28B-202ENST00000635857 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
LIN28B-202ENST00000635857 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
LIN28B-202ENST00000635857 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms