RNA–Protein interactions for RNA: ENST00000634760.1

SMARCA2-227, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 5,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-227ENST00000634760 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
SMARCA2-227ENST00000634760 MT1AP04731 61 aa6.24□□□□□ -1.41
SMARCA2-227ENST00000634760 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
SMARCA2-227ENST00000634760 MT4P47944 62 aa6.22□□□□□ -1.41
SMARCA2-227ENST00000634760 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
SMARCA2-227ENST00000634760 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
SMARCA2-227ENST00000634760 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.43
SMARCA2-227ENST00000634760 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
SMARCA2-227ENST00000634760 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
SMARCA2-227ENST00000634760 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
SMARCA2-227ENST00000634760 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
SMARCA2-227ENST00000634760 LCE1BQ5T7P3 118 aa5.99□□□□□ -1.45
SMARCA2-227ENST00000634760 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
SMARCA2-227ENST00000634760 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
SMARCA2-227ENST00000634760 ABCA13Q86UQ4 5058 aa5.89□□□□□ -1.47
SMARCA2-227ENST00000634760 EPPK1P58107 5090 aaKnown RBP5.83□□□□□ -1.48
SMARCA2-227ENST00000634760 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
SMARCA2-227ENST00000634760 KRTAP20-1Q3LI63 56 aa5.8□□□□□ -1.48
SMARCA2-227ENST00000634760 RNF213Q63HN8 5207 aa5.77□□□□□ -1.49
SMARCA2-227ENST00000634760 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
SMARCA2-227ENST00000634760 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
SMARCA2-227ENST00000634760 HMCN2Q8NDA2 5059 aa5.73□□□□□ -1.49
SMARCA2-227ENST00000634760 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
SMARCA2-227ENST00000634760 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
SMARCA2-227ENST00000634760 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.49
SMARCA2-227ENST00000634760 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
SMARCA2-227ENST00000634760 KRTAP6-2Q3LI66 62 aa5.6□□□□□ -1.51
SMARCA2-227ENST00000634760 KRTAP9-6A8MVA2 160 aa5.58□□□□□ -1.52
SMARCA2-227ENST00000634760 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
SMARCA2-227ENST00000634760 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
SMARCA2-227ENST00000634760 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
SMARCA2-227ENST00000634760 MUC2Q02817 5179 aa5.25□□□□□ -1.57
SMARCA2-227ENST00000634760 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
SMARCA2-227ENST00000634760 SYNE2Q8WXH0 6885 aaKnown RBP5.12□□□□□ -1.59
SMARCA2-227ENST00000634760 LCE1CQ5T751 118 aa5.1□□□□□ -1.59
SMARCA2-227ENST00000634760 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
SMARCA2-227ENST00000634760 LCE1FQ5T754 118 aa5.1□□□□□ -1.59
SMARCA2-227ENST00000634760 FSIP2Q5CZC0 6907 aa5.04□□□□□ -1.6
SMARCA2-227ENST00000634760 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
SMARCA2-227ENST00000634760 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
SMARCA2-227ENST00000634760 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
SMARCA2-227ENST00000634760 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
SMARCA2-227ENST00000634760 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
SMARCA2-227ENST00000634760 USH2AO75445 5202 aa4.63□□□□□ -1.67
SMARCA2-227ENST00000634760 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
SMARCA2-227ENST00000634760 NEBP20929 6669 aa4.53□□□□□ -1.68
SMARCA2-227ENST00000634760 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
SMARCA2-227ENST00000634760 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
SMARCA2-227ENST00000634760 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
SMARCA2-227ENST00000634760 KMT2DO14686 5537 aa4.44□□□□□ -1.7
SMARCA2-227ENST00000634760 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
SMARCA2-227ENST00000634760 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
SMARCA2-227ENST00000634760 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
SMARCA2-227ENST00000634760 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
SMARCA2-227ENST00000634760 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
SMARCA2-227ENST00000634760 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
SMARCA2-227ENST00000634760 KRTAP4-12Q9BQ66 201 aa3.99□□□□□ -1.77
SMARCA2-227ENST00000634760 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
SMARCA2-227ENST00000634760 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.78
SMARCA2-227ENST00000634760 MDN1Q9NU22 5596 aa3.9□□□□□ -1.79
SMARCA2-227ENST00000634760 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
SMARCA2-227ENST00000634760 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
SMARCA2-227ENST00000634760 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
SMARCA2-227ENST00000634760 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
SMARCA2-227ENST00000634760 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
SMARCA2-227ENST00000634760 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
SMARCA2-227ENST00000634760 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
SMARCA2-227ENST00000634760 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.9
SMARCA2-227ENST00000634760 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
SMARCA2-227ENST00000634760 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
SMARCA2-227ENST00000634760 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
SMARCA2-227ENST00000634760 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
SMARCA2-227ENST00000634760 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
SMARCA2-227ENST00000634760 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
SMARCA2-227ENST00000634760 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
SMARCA2-227ENST00000634760 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -1.99
SMARCA2-227ENST00000634760 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
SMARCA2-227ENST00000634760 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 64.8 ms