RNA–Protein interactions for RNA: ENST00000634308.1

ATP7B-211, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 4,321 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-211ENST00000634308 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.86
ATP7B-211ENST00000634308 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.86
ATP7B-211ENST00000634308 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
ATP7B-211ENST00000634308 KRTAP4-7Q9BYR0 210 aa3.34□□□□□ -1.87
ATP7B-211ENST00000634308 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
ATP7B-211ENST00000634308 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
ATP7B-211ENST00000634308 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
ATP7B-211ENST00000634308 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
ATP7B-211ENST00000634308 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
ATP7B-211ENST00000634308 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
ATP7B-211ENST00000634308 LCE3BQ5TA77 95 aa3.28□□□□□ -1.88
ATP7B-211ENST00000634308 KMT2DO14686 5537 aa3.27□□□□□ -1.89
ATP7B-211ENST00000634308 MT1GP13640 62 aa3.26□□□□□ -1.89
ATP7B-211ENST00000634308 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
ATP7B-211ENST00000634308 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
ATP7B-211ENST00000634308 MT1LQ93083 61 aa3.2□□□□□ -1.9
ATP7B-211ENST00000634308 MT4P47944 62 aa3.18□□□□□ -1.9
ATP7B-211ENST00000634308 MT1EP04732 61 aa3.17□□□□□ -1.9
ATP7B-211ENST00000634308 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
ATP7B-211ENST00000634308 NEBP20929 6669 aa3.14□□□□□ -1.91
ATP7B-211ENST00000634308 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
ATP7B-211ENST00000634308 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
ATP7B-211ENST00000634308 USH2AO75445 5202 aa3.12□□□□□ -1.91
ATP7B-211ENST00000634308 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
ATP7B-211ENST00000634308 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
ATP7B-211ENST00000634308 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
ATP7B-211ENST00000634308 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
ATP7B-211ENST00000634308 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.92
ATP7B-211ENST00000634308 DSTQ03001 7570 aaKnown RBP3.08□□□□□ -1.92
ATP7B-211ENST00000634308 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
ATP7B-211ENST00000634308 MT1MQ8N339 61 aa3.02□□□□□ -1.93
ATP7B-211ENST00000634308 SSPOA2VEC9 5147 aa3□□□□□ -1.93
ATP7B-211ENST00000634308 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
ATP7B-211ENST00000634308 KRTAP4-9Q9BYQ8 210 aa3□□□□□ -1.93
ATP7B-211ENST00000634308 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
ATP7B-211ENST00000634308 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
ATP7B-211ENST00000634308 PRM1P04553 51 aa2.92□□□□□ -1.94
ATP7B-211ENST00000634308 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
ATP7B-211ENST00000634308 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
ATP7B-211ENST00000634308 MUC12Q9UKN1 5478 aa2.8□□□□□ -1.96
ATP7B-211ENST00000634308 LCE5AQ5TCM9 118 aa2.75□□□□□ -1.97
ATP7B-211ENST00000634308 MT1AP04731 61 aa2.75□□□□□ -1.97
ATP7B-211ENST00000634308 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
ATP7B-211ENST00000634308 MT3P25713 68 aa2.72□□□□□ -1.97
ATP7B-211ENST00000634308 LCE1DQ5T752 114 aa2.7□□□□□ -1.98
ATP7B-211ENST00000634308 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
ATP7B-211ENST00000634308 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
ATP7B-211ENST00000634308 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
ATP7B-211ENST00000634308 KRTAP9-4Q9BYQ2 154 aa2.54□□□□□ -2
ATP7B-211ENST00000634308 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
ATP7B-211ENST00000634308 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
ATP7B-211ENST00000634308 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
ATP7B-211ENST00000634308 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
ATP7B-211ENST00000634308 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
ATP7B-211ENST00000634308 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
ATP7B-211ENST00000634308 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
ATP7B-211ENST00000634308 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
ATP7B-211ENST00000634308 KRTAP4-11Q9BYQ6 195 aa2.34□□□□□ -2.04
ATP7B-211ENST00000634308 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
ATP7B-211ENST00000634308 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
ATP7B-211ENST00000634308 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
ATP7B-211ENST00000634308 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
ATP7B-211ENST00000634308 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
ATP7B-211ENST00000634308 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.08
ATP7B-211ENST00000634308 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
ATP7B-211ENST00000634308 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
ATP7B-211ENST00000634308 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
ATP7B-211ENST00000634308 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
ATP7B-211ENST00000634308 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
ATP7B-211ENST00000634308 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
ATP7B-211ENST00000634308 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
ATP7B-211ENST00000634308 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
ATP7B-211ENST00000634308 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
ATP7B-211ENST00000634308 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
ATP7B-211ENST00000634308 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
ATP7B-211ENST00000634308 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
ATP7B-211ENST00000634308 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
ATP7B-211ENST00000634308 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 57.5 ms