RNA–Protein interactions for RNA: ENST00000629669.2

MCCC1-215, Transcript of methylcrotonoyl-CoA carboxylase 1, human

TSL 5 BASIC

Gene MCCC1, Length 2,316 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCCC1-215	ENST00000629669	KRTAP2-1	Q9BYU5	128 aa		6.42	□□□□□ -1.38
MCCC1-215	ENST00000629669	KRTAP4-7	Q9BYR0	210 aa		6.41	□□□□□ -1.38
MCCC1-215	ENST00000629669	KRTAP19-7	Q3SYF9	63 aa		6.41	□□□□□ -1.38
MCCC1-215	ENST00000629669	SYNE2	Q8WXH0	6885 aa	Known RBP	6.32	□□□□□ -1.4
MCCC1-215	ENST00000629669	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.23	□□□□□ -1.41
MCCC1-215	ENST00000629669	MT1L	Q93083	61 aa		6.22	□□□□□ -1.41
MCCC1-215	ENST00000629669	MT1E	P04732	61 aa		6.18	□□□□□ -1.42
MCCC1-215	ENST00000629669	KRTAP19-4	Q3LI73	84 aa		6.16	□□□□□ -1.42
MCCC1-215	ENST00000629669	SPRR2F	Q96RM1	72 aa		6.12	□□□□□ -1.43
MCCC1-215	ENST00000629669	MUC12	Q9UKN1	5478 aa		6.07	□□□□□ -1.44
MCCC1-215	ENST00000629669	KRTAP5-9	P26371	169 aa		6.03	□□□□□ -1.44
MCCC1-215	ENST00000629669	KRTAP6-3	Q3LI67	103 aa		6	□□□□□ -1.45
MCCC1-215	ENST00000629669	LOC100996750	A0A140TA64	210 aa		5.96	□□□□□ -1.46
MCCC1-215	ENST00000629669	KRTAP9-7	A8MTY7	169 aa		5.95	□□□□□ -1.46
MCCC1-215	ENST00000629669	KRTAP4-3	Q9BYR4	195 aa		5.92	□□□□□ -1.46
MCCC1-215	ENST00000629669	MDN1	Q9NU22	5596 aa		5.9	□□□□□ -1.46
MCCC1-215	ENST00000629669	KRTAP19-3	Q7Z4W3	81 aa		5.86	□□□□□ -1.47
MCCC1-215	ENST00000629669	MT1G	P13640	62 aa		5.85	□□□□□ -1.47
MCCC1-215	ENST00000629669	LCE1A	Q5T7P2	110 aa		5.84	□□□□□ -1.47
MCCC1-215	ENST00000629669	SPRR2E	P22531	72 aa		5.83	□□□□□ -1.48
MCCC1-215	ENST00000629669	SPRR2B	P35325	72 aa		5.83	□□□□□ -1.48
MCCC1-215	ENST00000629669	SPRR2A	P35326	72 aa		5.83	□□□□□ -1.48
MCCC1-215	ENST00000629669	LCE5A	Q5TCM9	118 aa		5.78	□□□□□ -1.48
MCCC1-215	ENST00000629669	MT1M	Q8N339	61 aa		5.75	□□□□□ -1.49
MCCC1-215	ENST00000629669	KRTAP12-4	P60329	112 aa		5.73	□□□□□ -1.49
MCCC1-215	ENST00000629669	DST	Q03001	7570 aa	Known RBP	5.69	□□□□□ -1.5
MCCC1-215	ENST00000629669	NEB	P20929	6669 aa		5.66	□□□□□ -1.5
MCCC1-215	ENST00000629669	SPRR2D	P22532	72 aa		5.62	□□□□□ -1.51
MCCC1-215	ENST00000629669	LCE3B	Q5TA77	95 aa		5.48	□□□□□ -1.53
MCCC1-215	ENST00000629669	KRTAP4-9	Q9BYQ8	210 aa		5.46	□□□□□ -1.54
MCCC1-215	ENST00000629669	MT1A	P04731	61 aa		5.35	□□□□□ -1.55
MCCC1-215	ENST00000629669	SYNE1	Q8NF91	8797 aa	Known RBP	5.33	□□□□□ -1.56
MCCC1-215	ENST00000629669	KRTAP6-1	Q3LI64	71 aa		5.31	□□□□□ -1.56
MCCC1-215	ENST00000629669	KRTAP20-1	Q3LI63	56 aa		5.25	□□□□□ -1.57
MCCC1-215	ENST00000629669	LCE3D	Q9BYE3	92 aa		5.22	□□□□□ -1.57
MCCC1-215	ENST00000629669	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.2	□□□□□ -1.58
MCCC1-215	ENST00000629669	LCE3E	Q5T5B0	92 aa		5.18	□□□□□ -1.58
MCCC1-215	ENST00000629669	KRTAP2-2	Q9BYT5	123 aa		5.17	□□□□□ -1.58
MCCC1-215	ENST00000629669	PRM1	P04553	51 aa		5.12	□□□□□ -1.59
MCCC1-215	ENST00000629669	KRTAP5-4	Q6L8H1	288 aa		4.98	□□□□□ -1.61
MCCC1-215	ENST00000629669	MT4	P47944	62 aa		4.93	□□□□□ -1.62
MCCC1-215	ENST00000629669	LCE4A	Q5TA78	99 aa		4.92	□□□□□ -1.62
MCCC1-215	ENST00000629669	KRTAP6-2	Q3LI66	62 aa		4.9	□□□□□ -1.63
MCCC1-215	ENST00000629669	KRTAP9-4	Q9BYQ2	154 aa		4.87	□□□□□ -1.63
MCCC1-215	ENST00000629669	KRTAP4-6	Q9BYQ5	205 aa		4.86	□□□□□ -1.63
MCCC1-215	ENST00000629669	LCE1D	Q5T752	114 aa		4.83	□□□□□ -1.64
MCCC1-215	ENST00000629669	HMCN1	Q96RW7	5635 aa		4.74	□□□□□ -1.65
MCCC1-215	ENST00000629669	KRTAP20-2	Q3LI61	65 aa		4.71	□□□□□ -1.66
MCCC1-215	ENST00000629669	MT3	P25713	68 aa		4.63	□□□□□ -1.67
MCCC1-215	ENST00000629669	OBSCN	Q5VST9	7968 aa		4.62	□□□□□ -1.67
MCCC1-215	ENST00000629669	KRTAP5-3	Q6L8H2	238 aa		4.52	□□□□□ -1.69
MCCC1-215	ENST00000629669	KRTAP5-2	Q701N4	177 aa		4.49	□□□□□ -1.69
MCCC1-215	ENST00000629669	AHNAK2	Q8IVF2	5795 aa		4.24	□□□□□ -1.73
MCCC1-215	ENST00000629669	KRTAP4-11	Q9BYQ6	195 aa		4.12	□□□□□ -1.75
MCCC1-215	ENST00000629669	KRTAP5-10	Q6L8G5	202 aa		4.07	□□□□□ -1.76
MCCC1-215	ENST00000629669	MUC5AC	P98088	5654 aa		4.03	□□□□□ -1.76
MCCC1-215	ENST00000629669	KRTAP5-8	O75690	187 aa		3.97	□□□□□ -1.77
MCCC1-215	ENST00000629669	LCE1E	Q5T753	118 aa		3.96	□□□□□ -1.78
MCCC1-215	ENST00000629669	GPR98	Q8WXG9	6306 aa		3.96	□□□□□ -1.78
MCCC1-215	ENST00000629669	KRTAP5-1	Q6L8H4	278 aa		3.94	□□□□□ -1.78
MCCC1-215	ENST00000629669	LCE1B	Q5T7P3	118 aa		3.82	□□□□□ -1.8
MCCC1-215	ENST00000629669	KRTAP5-7	Q6L8G8	165 aa		3.76	□□□□□ -1.81
MCCC1-215	ENST00000629669	KRTAP4-2	Q9BYR5	136 aa		3.74	□□□□□ -1.81
MCCC1-215	ENST00000629669	LCE1C	Q5T751	118 aa		3.71	□□□□□ -1.82
MCCC1-215	ENST00000629669	KRTAP9-9	Q9BYP9	154 aa		3.61	□□□□□ -1.83
MCCC1-215	ENST00000629669	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.45	□□□□□ -1.86
MCCC1-215	ENST00000629669	KRTAP4-12	Q9BQ66	201 aa		3.44	□□□□□ -1.86
MCCC1-215	ENST00000629669	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.42	□□□□□ -1.86
MCCC1-215	ENST00000629669	KRTAP21-2	Q3LI59	83 aa		3.42	□□□□□ -1.86
MCCC1-215	ENST00000629669	KRTAP5-11	Q6L8G4	156 aa		3.27	□□□□□ -1.89
MCCC1-215	ENST00000629669	KRTAP21-1	Q3LI58	79 aa		3.26	□□□□□ -1.89
MCCC1-215	ENST00000629669	AHNAK	Q09666	5890 aa	Known RBP	3.21	□□□□□ -1.9
MCCC1-215	ENST00000629669	KRTAP4-4	Q9BYR3	166 aa		3.15	□□□□□ -1.91
MCCC1-215	ENST00000629669	MUC19	Q7Z5P9	8384 aa		3.07	□□□□□ -1.92
MCCC1-215	ENST00000629669	LCE1F	Q5T754	118 aa		2.97	□□□□□ -1.93
MCCC1-215	ENST00000629669	PHGR1	C9JFL3	82 aa		2.84	□□□□□ -1.96
MCCC1-215	ENST00000629669	MUC16	Q8WXI7	14507 aa		1.8	□□□□□ -2.12

Retrieved 77 of 20,778 RNA–protein pairs in 81 ms