RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
SHPRH-211ENST00000629427 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
SHPRH-211ENST00000629427 RYR2Q92736 4967 aa3.35□□□□□ -1.87
SHPRH-211ENST00000629427 KMT2CQ8NEZ4 4911 aaKnown RBP3.34□□□□□ -1.88
SHPRH-211ENST00000629427 MT1AP04731 61 aa3.33□□□□□ -1.88
SHPRH-211ENST00000629427 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
SHPRH-211ENST00000629427 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
SHPRH-211ENST00000629427 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
SHPRH-211ENST00000629427 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
SHPRH-211ENST00000629427 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
SHPRH-211ENST00000629427 HERC2O95714 4834 aa3.3□□□□□ -1.88
SHPRH-211ENST00000629427 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
SHPRH-211ENST00000629427 LCE2AQ5TA79 106 aaPredicted RBP3.27□□□□□ -1.89
SHPRH-211ENST00000629427 KIAA1109Q2LD37 5005 aa3.24□□□□□ -1.89
SHPRH-211ENST00000629427 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
SHPRH-211ENST00000629427 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
SHPRH-211ENST00000629427 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
SHPRH-211ENST00000629427 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
SHPRH-211ENST00000629427 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
SHPRH-211ENST00000629427 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
SHPRH-211ENST00000629427 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
SHPRH-211ENST00000629427 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
SHPRH-211ENST00000629427 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
SHPRH-211ENST00000629427 PCLOQ9Y6V0 5065 aa3.14□□□□□ -1.91
SHPRH-211ENST00000629427 HERC1Q15751 4861 aa3.14□□□□□ -1.91
SHPRH-211ENST00000629427 HMCN2Q8NDA2 5059 aa3.13□□□□□ -1.91
SHPRH-211ENST00000629427 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
SHPRH-211ENST00000629427 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.92
SHPRH-211ENST00000629427 BIRC6Q9NR09 4857 aa3.06□□□□□ -1.92
SHPRH-211ENST00000629427 FSIP2Q5CZC0 6907 aa3□□□□□ -1.93
SHPRH-211ENST00000629427 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
SHPRH-211ENST00000629427 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
SHPRH-211ENST00000629427 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
SHPRH-211ENST00000629427 FAT4Q6V0I7 4981 aa2.84□□□□□ -1.95
SHPRH-211ENST00000629427 EPPK1P58107 5090 aaKnown RBP2.84□□□□□ -1.95
SHPRH-211ENST00000629427 MUC2Q02817 5179 aa2.81□□□□□ -1.96
SHPRH-211ENST00000629427 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
SHPRH-211ENST00000629427 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.97
SHPRH-211ENST00000629427 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
SHPRH-211ENST00000629427 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
SHPRH-211ENST00000629427 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.98
SHPRH-211ENST00000629427 ABCA13Q86UQ4 5058 aa2.62□□□□□ -1.99
SHPRH-211ENST00000629427 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
SHPRH-211ENST00000629427 KRTAP5-9P26371 169 aa2.54□□□□□ -2
SHPRH-211ENST00000629427 KMT2DO14686 5537 aa2.54□□□□□ -2
SHPRH-211ENST00000629427 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
SHPRH-211ENST00000629427 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
SHPRH-211ENST00000629427 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
SHPRH-211ENST00000629427 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
SHPRH-211ENST00000629427 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
SHPRH-211ENST00000629427 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
SHPRH-211ENST00000629427 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
SHPRH-211ENST00000629427 NEBP20929 6669 aa2.31□□□□□ -2.04
SHPRH-211ENST00000629427 USH2AO75445 5202 aa2.25□□□□□ -2.05
SHPRH-211ENST00000629427 SSPOA2VEC9 5147 aa2.21□□□□□ -2.06
SHPRH-211ENST00000629427 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
SHPRH-211ENST00000629427 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SHPRH-211ENST00000629427 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
SHPRH-211ENST00000629427 KRTAP5-3Q6L8H2 238 aa2.05□□□□□ -2.08
SHPRH-211ENST00000629427 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
SHPRH-211ENST00000629427 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
SHPRH-211ENST00000629427 KRTAP5-8O75690 187 aa1.9□□□□□ -2.1
SHPRH-211ENST00000629427 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
SHPRH-211ENST00000629427 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
SHPRH-211ENST00000629427 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
SHPRH-211ENST00000629427 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
SHPRH-211ENST00000629427 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
SHPRH-211ENST00000629427 KRTAP5-1Q6L8H4 278 aa1.61□□□□□ -2.15
SHPRH-211ENST00000629427 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
SHPRH-211ENST00000629427 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
SHPRH-211ENST00000629427 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
SHPRH-211ENST00000629427 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.19
SHPRH-211ENST00000629427 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.2
SHPRH-211ENST00000629427 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.29□□□□□ -2.2
SHPRH-211ENST00000629427 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
SHPRH-211ENST00000629427 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
SHPRH-211ENST00000629427 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 86.6 ms