RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
TCF4-268ENST00000629387 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
TCF4-268ENST00000629387 NEBP20929 6669 aa2.21□□□□□ -2.06
TCF4-268ENST00000629387 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
TCF4-268ENST00000629387 MT1HP80294 61 aa2.18□□□□□ -2.06
TCF4-268ENST00000629387 KRTAP10-12P60413 245 aa2.18□□□□□ -2.06
TCF4-268ENST00000629387 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
TCF4-268ENST00000629387 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
TCF4-268ENST00000629387 KRTAP10-5P60370 271 aa2.17□□□□□ -2.06
TCF4-268ENST00000629387 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
TCF4-268ENST00000629387 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.06
TCF4-268ENST00000629387 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
TCF4-268ENST00000629387 MT2AP02795 61 aa2.14□□□□□ -2.07
TCF4-268ENST00000629387 KRTAP2-3P0C7H8 128 aa2.13□□□□□ -2.07
TCF4-268ENST00000629387 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
TCF4-268ENST00000629387 KRTAP2-4Q9BYR9 128 aa2.13□□□□□ -2.07
TCF4-268ENST00000629387 MT3P25713 68 aa2.12□□□□□ -2.07
TCF4-268ENST00000629387 MT1FP04733 61 aa2.11□□□□□ -2.07
TCF4-268ENST00000629387 KRTAP5-9P26371 169 aa2.11□□□□□ -2.07
TCF4-268ENST00000629387 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
TCF4-268ENST00000629387 KRTAP19-2Q3LHN2 52 aa2.08□□□□□ -2.08
TCF4-268ENST00000629387 USH2AO75445 5202 aa2.07□□□□□ -2.08
TCF4-268ENST00000629387 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
TCF4-268ENST00000629387 FSIP2Q5CZC0 6907 aa2.03□□□□□ -2.08
TCF4-268ENST00000629387 KRTAP10-7P60409 375 aaPredicted RBP2.03□□□□□ -2.09
TCF4-268ENST00000629387 KRTAP2-1Q9BYU5 128 aa2.01□□□□□ -2.09
TCF4-268ENST00000629387 SYNE2Q8WXH0 6885 aaKnown RBP2□□□□□ -2.09
TCF4-268ENST00000629387 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
TCF4-268ENST00000629387 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
TCF4-268ENST00000629387 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
TCF4-268ENST00000629387 KRTAP19-8Q3LI54 63 aa1.97□□□□□ -2.09
TCF4-268ENST00000629387 FCGBPQ9Y6R7 5405 aaPredicted RBP1.96□□□□□ -2.1
TCF4-268ENST00000629387 MT1BP07438 61 aa1.95□□□□□ -2.1
TCF4-268ENST00000629387 PRM1P04553 51 aa1.94□□□□□ -2.1
TCF4-268ENST00000629387 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
TCF4-268ENST00000629387 MT1XP80297 61 aa1.93□□□□□ -2.1
TCF4-268ENST00000629387 KRTAP19-5Q3LI72 72 aa1.91□□□□□ -2.1
TCF4-268ENST00000629387 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
TCF4-268ENST00000629387 SPRR2FQ96RM1 72 aa1.9□□□□□ -2.11
TCF4-268ENST00000629387 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
TCF4-268ENST00000629387 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
TCF4-268ENST00000629387 KRTAP19-6Q3LI70 58 aa1.85□□□□□ -2.11
TCF4-268ENST00000629387 KMT2DO14686 5537 aa1.84□□□□□ -2.12
TCF4-268ENST00000629387 KRTAP5-4Q6L8H1 288 aa1.82□□□□□ -2.12
TCF4-268ENST00000629387 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
TCF4-268ENST00000629387 SPRR2EP22531 72 aa1.75□□□□□ -2.13
TCF4-268ENST00000629387 SPRR2BP35325 72 aa1.75□□□□□ -2.13
TCF4-268ENST00000629387 SPRR2AP35326 72 aa1.75□□□□□ -2.13
TCF4-268ENST00000629387 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
TCF4-268ENST00000629387 MT1GP13640 62 aa1.73□□□□□ -2.13
TCF4-268ENST00000629387 MUC12Q9UKN1 5478 aa1.72□□□□□ -2.13
TCF4-268ENST00000629387 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
TCF4-268ENST00000629387 MT1EP04732 61 aa1.71□□□□□ -2.14
TCF4-268ENST00000629387 MT1LQ93083 61 aa1.7□□□□□ -2.14
TCF4-268ENST00000629387 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
TCF4-268ENST00000629387 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
TCF4-268ENST00000629387 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
TCF4-268ENST00000629387 SPRR2DP22532 72 aa1.68□□□□□ -2.14
TCF4-268ENST00000629387 KRTAP19-7Q3SYF9 63 aa1.67□□□□□ -2.14
TCF4-268ENST00000629387 MDN1Q9NU22 5596 aa1.66□□□□□ -2.14
TCF4-268ENST00000629387 KRTAP4-3Q9BYR4 195 aa1.65□□□□□ -2.15
TCF4-268ENST00000629387 MT1MQ8N339 61 aa1.64□□□□□ -2.15
TCF4-268ENST00000629387 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
TCF4-268ENST00000629387 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.16
TCF4-268ENST00000629387 KRTAP5-5Q701N2 237 aaPredicted RBP1.58□□□□□ -2.16
TCF4-268ENST00000629387 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
TCF4-268ENST00000629387 MT4P47944 62 aa1.53□□□□□ -2.17
TCF4-268ENST00000629387 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
TCF4-268ENST00000629387 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
TCF4-268ENST00000629387 MT1AP04731 61 aa1.47□□□□□ -2.17
TCF4-268ENST00000629387 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
TCF4-268ENST00000629387 KRTAP6-1Q3LI64 71 aa1.45□□□□□ -2.18
TCF4-268ENST00000629387 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
TCF4-268ENST00000629387 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
TCF4-268ENST00000629387 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
TCF4-268ENST00000629387 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
TCF4-268ENST00000629387 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 52.9 ms