RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 MT1GP13640 62 aa7.41□□□□□ -1.22
CIRBP-246ENST00000628979 K7ERS5 55 aa7.36□□□□□ -1.23
CIRBP-246ENST00000628979 PP632Q6XCG6 107 aa7.36□□□□□ -1.23
CIRBP-246ENST00000628979 MT1LQ93083 61 aa7.36□□□□□ -1.23
CIRBP-246ENST00000628979 MT1MQ8N339 61 aa7.3□□□□□ -1.24
CIRBP-246ENST00000628979 DSTQ03001 7570 aaKnown RBP7.25□□□□□ -1.25
CIRBP-246ENST00000628979 A6NED7 52 aa7.23□□□□□ -1.25
CIRBP-246ENST00000628979 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
CIRBP-246ENST00000628979 KRTAP12-3P60328 96 aa7.22□□□□□ -1.25
CIRBP-246ENST00000628979 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
CIRBP-246ENST00000628979 CDC42SE1Q9NRR8 79 aa7.14□□□□□ -1.27
CIRBP-246ENST00000628979 KRTAP4-9Q9BYQ8 210 aa7.13□□□□□ -1.27
CIRBP-246ENST00000628979 BRK1Q8WUW1 75 aa7.12□□□□□ -1.27
CIRBP-246ENST00000628979 PRO0628Q9UI54 55 aa7.11□□□□□ -1.27
CIRBP-246ENST00000628979 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
CIRBP-246ENST00000628979 LCE4AQ5TA78 99 aa6.96□□□□□ -1.3
CIRBP-246ENST00000628979 LCE1DQ5T752 114 aa6.94□□□□□ -1.3
CIRBP-246ENST00000628979 MT4P47944 62 aa6.93□□□□□ -1.3
CIRBP-246ENST00000628979 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
CIRBP-246ENST00000628979 ROMO1P60602 79 aa6.88□□□□□ -1.31
CIRBP-246ENST00000628979 KRTAP5-4Q6L8H1 288 aa6.82□□□□□ -1.32
CIRBP-246ENST00000628979 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
CIRBP-246ENST00000628979 PMAIP1Q13794 54 aa6.79□□□□□ -1.32
CIRBP-246ENST00000628979 HMCN1Q96RW7 5635 aa6.73□□□□□ -1.33
CIRBP-246ENST00000628979 KRTAP19-4Q3LI73 84 aa6.73□□□□□ -1.33
CIRBP-246ENST00000628979 KRTAP4-6Q9BYQ5 205 aa6.72□□□□□ -1.33
CIRBP-246ENST00000628979 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
CIRBP-246ENST00000628979 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
CIRBP-246ENST00000628979 KRTAP5-5Q701N2 237 aaPredicted RBP6.64□□□□□ -1.35
CIRBP-246ENST00000628979 GPR98Q8WXG9 6306 aa6.62□□□□□ -1.35
CIRBP-246ENST00000628979 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
CIRBP-246ENST00000628979 KRTAP12-4P60329 112 aa6.48□□□□□ -1.37
CIRBP-246ENST00000628979 KRTAP20-2Q3LI61 65 aa6.47□□□□□ -1.37
CIRBP-246ENST00000628979 AHNAK2Q8IVF2 5795 aa6.45□□□□□ -1.38
CIRBP-246ENST00000628979 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
CIRBP-246ENST00000628979 KRTAP5-10Q6L8G5 202 aa6.33□□□□□ -1.4
CIRBP-246ENST00000628979 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
CIRBP-246ENST00000628979 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
CIRBP-246ENST00000628979 MT1AP04731 61 aa6.26□□□□□ -1.41
CIRBP-246ENST00000628979 KRTAP5-3Q6L8H2 238 aa6.25□□□□□ -1.41
CIRBP-246ENST00000628979 KRTAP6-1Q3LI64 71 aa6.24□□□□□ -1.41
CIRBP-246ENST00000628979 PRAC1Q96KF2 57 aa6.18□□□□□ -1.42
CIRBP-246ENST00000628979 H3BS24 57 aa6.15□□□□□ -1.42
CIRBP-246ENST00000628979 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
CIRBP-246ENST00000628979 KRTAP5-7Q6L8G8 165 aa6.06□□□□□ -1.44
CIRBP-246ENST00000628979 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
CIRBP-246ENST00000628979 KRTAP5-2Q701N4 177 aa6□□□□□ -1.45
CIRBP-246ENST00000628979 KRTAP6-2Q3LI66 62 aa5.94□□□□□ -1.46
CIRBP-246ENST00000628979 KRTAP4-11Q9BYQ6 195 aa5.86□□□□□ -1.47
CIRBP-246ENST00000628979 MT3P25713 68 aa5.73□□□□□ -1.49
CIRBP-246ENST00000628979 KRTAP5-8O75690 187 aa5.65□□□□□ -1.5
CIRBP-246ENST00000628979 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
CIRBP-246ENST00000628979 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
CIRBP-246ENST00000628979 KRTAP5-1Q6L8H4 278 aa5.36□□□□□ -1.55
CIRBP-246ENST00000628979 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
CIRBP-246ENST00000628979 MUC5BQ9HC84 5762 aaPredicted RBP5.26□□□□□ -1.57
CIRBP-246ENST00000628979 MUC5ACP98088 5654 aa5.23□□□□□ -1.57
CIRBP-246ENST00000628979 AHNAKQ09666 5890 aaKnown RBP5.21□□□□□ -1.58
CIRBP-246ENST00000628979 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
CIRBP-246ENST00000628979 NDUFAF8A1L188 74 aa5.01□□□□□ -1.61
CIRBP-246ENST00000628979 LCE1BQ5T7P3 118 aa4.97□□□□□ -1.61
CIRBP-246ENST00000628979 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
CIRBP-246ENST00000628979 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
CIRBP-246ENST00000628979 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
CIRBP-246ENST00000628979 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
CIRBP-246ENST00000628979 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
CIRBP-246ENST00000628979 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
CIRBP-246ENST00000628979 INE1O15225 51 aa4.35□□□□□ -1.71
CIRBP-246ENST00000628979 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
CIRBP-246ENST00000628979 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
CIRBP-246ENST00000628979 KRTAP21-2Q3LI59 83 aa4.08□□□□□ -1.76
CIRBP-246ENST00000628979 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
CIRBP-246ENST00000628979 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
CIRBP-246ENST00000628979 PRM1P04553 51 aa3.54□□□□□ -1.84
CIRBP-246ENST00000628979 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
CIRBP-246ENST00000628979 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
CIRBP-246ENST00000628979 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms