RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
SYNGAP1-207ENST00000628646 SPRR2EP22531 72 aa4.62□□□□□ -1.67
SYNGAP1-207ENST00000628646 SPRR2BP35325 72 aa4.62□□□□□ -1.67
SYNGAP1-207ENST00000628646 SPRR2AP35326 72 aa4.62□□□□□ -1.67
SYNGAP1-207ENST00000628646 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.68
SYNGAP1-207ENST00000628646 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
SYNGAP1-207ENST00000628646 SPRR2DP22532 72 aa4.46□□□□□ -1.7
SYNGAP1-207ENST00000628646 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
SYNGAP1-207ENST00000628646 INE1O15225 51 aa4.43□□□□□ -1.7
SYNGAP1-207ENST00000628646 MT1EP04732 61 aa4.43□□□□□ -1.7
SYNGAP1-207ENST00000628646 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
SYNGAP1-207ENST00000628646 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
SYNGAP1-207ENST00000628646 MT1GP13640 62 aa4.37□□□□□ -1.71
SYNGAP1-207ENST00000628646 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
SYNGAP1-207ENST00000628646 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
SYNGAP1-207ENST00000628646 MT1LQ93083 61 aa4.32□□□□□ -1.72
SYNGAP1-207ENST00000628646 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
SYNGAP1-207ENST00000628646 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
SYNGAP1-207ENST00000628646 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
SYNGAP1-207ENST00000628646 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
SYNGAP1-207ENST00000628646 MT1MQ8N339 61 aa4.23□□□□□ -1.73
SYNGAP1-207ENST00000628646 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
SYNGAP1-207ENST00000628646 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
SYNGAP1-207ENST00000628646 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
SYNGAP1-207ENST00000628646 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
SYNGAP1-207ENST00000628646 NEBP20929 6669 aa4.14□□□□□ -1.75
SYNGAP1-207ENST00000628646 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
SYNGAP1-207ENST00000628646 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
SYNGAP1-207ENST00000628646 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
SYNGAP1-207ENST00000628646 KRTAP2-1Q9BYU5 128 aa4.09□□□□□ -1.75
SYNGAP1-207ENST00000628646 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
SYNGAP1-207ENST00000628646 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
SYNGAP1-207ENST00000628646 MT4P47944 62 aa3.95□□□□□ -1.78
SYNGAP1-207ENST00000628646 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
SYNGAP1-207ENST00000628646 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
SYNGAP1-207ENST00000628646 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
SYNGAP1-207ENST00000628646 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
SYNGAP1-207ENST00000628646 MT1AP04731 61 aa3.72□□□□□ -1.81
SYNGAP1-207ENST00000628646 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
SYNGAP1-207ENST00000628646 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
SYNGAP1-207ENST00000628646 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
SYNGAP1-207ENST00000628646 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.84
SYNGAP1-207ENST00000628646 MT3P25713 68 aa3.56□□□□□ -1.84
SYNGAP1-207ENST00000628646 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
SYNGAP1-207ENST00000628646 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
SYNGAP1-207ENST00000628646 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
SYNGAP1-207ENST00000628646 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
SYNGAP1-207ENST00000628646 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
SYNGAP1-207ENST00000628646 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
SYNGAP1-207ENST00000628646 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
SYNGAP1-207ENST00000628646 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
SYNGAP1-207ENST00000628646 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
SYNGAP1-207ENST00000628646 PRM1P04553 51 aa3.21□□□□□ -1.9
SYNGAP1-207ENST00000628646 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
SYNGAP1-207ENST00000628646 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
SYNGAP1-207ENST00000628646 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
SYNGAP1-207ENST00000628646 AHNAK2Q8IVF2 5795 aa3.1□□□□□ -1.91
SYNGAP1-207ENST00000628646 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
SYNGAP1-207ENST00000628646 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
SYNGAP1-207ENST00000628646 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
SYNGAP1-207ENST00000628646 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
SYNGAP1-207ENST00000628646 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
SYNGAP1-207ENST00000628646 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
SYNGAP1-207ENST00000628646 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
SYNGAP1-207ENST00000628646 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
SYNGAP1-207ENST00000628646 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
SYNGAP1-207ENST00000628646 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
SYNGAP1-207ENST00000628646 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
SYNGAP1-207ENST00000628646 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
SYNGAP1-207ENST00000628646 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
SYNGAP1-207ENST00000628646 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
SYNGAP1-207ENST00000628646 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
SYNGAP1-207ENST00000628646 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
SYNGAP1-207ENST00000628646 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
SYNGAP1-207ENST00000628646 PHGR1C9JFL3 82 aa2□□□□□ -2.09
SYNGAP1-207ENST00000628646 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
SYNGAP1-207ENST00000628646 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 32.8 ms