RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 NEBP20929 6669 aa3.17□□□□□ -1.9
CHD2-213ENST00000628118 KMT2DO14686 5537 aa3.17□□□□□ -1.9
CHD2-213ENST00000628118 MIR22HGQ0VDD5 57 aa3.17□□□□□ -1.9
CHD2-213ENST00000628118 MUC12Q9UKN1 5478 aa3.16□□□□□ -1.9
CHD2-213ENST00000628118 PSPHP1O15172 72 aa3.15□□□□□ -1.91
CHD2-213ENST00000628118 K7ERS5 55 aa3.13□□□□□ -1.91
CHD2-213ENST00000628118 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
CHD2-213ENST00000628118 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
CHD2-213ENST00000628118 TNP1P09430 55 aa3.1□□□□□ -1.91
CHD2-213ENST00000628118 A6NED7 52 aa3.08□□□□□ -1.92
CHD2-213ENST00000628118 C10orf95Q9H7T3 257 aa3.07□□□□□ -1.92
CHD2-213ENST00000628118 SPRR2EP22531 72 aa3.06□□□□□ -1.92
CHD2-213ENST00000628118 SPRR2BP35325 72 aa3.06□□□□□ -1.92
CHD2-213ENST00000628118 SPRR2AP35326 72 aa3.06□□□□□ -1.92
CHD2-213ENST00000628118 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
CHD2-213ENST00000628118 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
CHD2-213ENST00000628118 BRK1Q8WUW1 75 aa3.01□□□□□ -1.93
CHD2-213ENST00000628118 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
CHD2-213ENST00000628118 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
CHD2-213ENST00000628118 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
CHD2-213ENST00000628118 CDC42SE1Q9NRR8 79 aa3□□□□□ -1.93
CHD2-213ENST00000628118 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
CHD2-213ENST00000628118 MT1EP04732 61 aa2.98□□□□□ -1.93
CHD2-213ENST00000628118 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
CHD2-213ENST00000628118 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
CHD2-213ENST00000628118 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
CHD2-213ENST00000628118 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
CHD2-213ENST00000628118 SPRR2DP22532 72 aa2.96□□□□□ -1.94
CHD2-213ENST00000628118 KRTAP19-5Q3LI72 72 aa2.95□□□□□ -1.94
CHD2-213ENST00000628118 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
CHD2-213ENST00000628118 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
CHD2-213ENST00000628118 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
CHD2-213ENST00000628118 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
CHD2-213ENST00000628118 MT1GP13640 62 aa2.91□□□□□ -1.94
CHD2-213ENST00000628118 PMAIP1Q13794 54 aa2.91□□□□□ -1.94
CHD2-213ENST00000628118 ROMO1P60602 79 aa2.9□□□□□ -1.95
CHD2-213ENST00000628118 PP632Q6XCG6 107 aa2.9□□□□□ -1.95
CHD2-213ENST00000628118 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
CHD2-213ENST00000628118 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
CHD2-213ENST00000628118 MT1LQ93083 61 aa2.87□□□□□ -1.95
CHD2-213ENST00000628118 KTN1-AS1Q86SY8 53 aa2.85□□□□□ -1.95
CHD2-213ENST00000628118 MT1MQ8N339 61 aa2.82□□□□□ -1.96
CHD2-213ENST00000628118 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
CHD2-213ENST00000628118 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
CHD2-213ENST00000628118 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
CHD2-213ENST00000628118 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
CHD2-213ENST00000628118 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
CHD2-213ENST00000628118 LUZP6Q538Z0 58 aa2.56□□□□□ -2
CHD2-213ENST00000628118 MT4P47944 62 aa2.54□□□□□ -2
CHD2-213ENST00000628118 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
CHD2-213ENST00000628118 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
CHD2-213ENST00000628118 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
CHD2-213ENST00000628118 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
CHD2-213ENST00000628118 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
CHD2-213ENST00000628118 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
CHD2-213ENST00000628118 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
CHD2-213ENST00000628118 MT1AP04731 61 aa2.46□□□□□ -2.02
CHD2-213ENST00000628118 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
CHD2-213ENST00000628118 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
CHD2-213ENST00000628118 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
CHD2-213ENST00000628118 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
CHD2-213ENST00000628118 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
CHD2-213ENST00000628118 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
CHD2-213ENST00000628118 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
CHD2-213ENST00000628118 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
CHD2-213ENST00000628118 LCE3DQ9BYE3 92 aa2.04□□□□□ -2.08
CHD2-213ENST00000628118 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
CHD2-213ENST00000628118 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
CHD2-213ENST00000628118 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
CHD2-213ENST00000628118 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
CHD2-213ENST00000628118 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
CHD2-213ENST00000628118 INE1O15225 51 aa1.9□□□□□ -2.11
CHD2-213ENST00000628118 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
CHD2-213ENST00000628118 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
CHD2-213ENST00000628118 PRM1P04553 51 aa1.47□□□□□ -2.17
CHD2-213ENST00000628118 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
CHD2-213ENST00000628118 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
CHD2-213ENST00000628118 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 87.9 ms