RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 LINC01558Q9Y6Z2 57 aa3.6□□□□□ -1.83
CHD2-212ENST00000627622 SPANXA2-OT1Q8N9U9 137 aa3.59□□□□□ -1.83
CHD2-212ENST00000627622 PLAC4Q8WY50 150 aa3.59□□□□□ -1.83
CHD2-212ENST00000627622 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
CHD2-212ENST00000627622 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
CHD2-212ENST00000627622 LINC00208Q96KT6 92 aa3.55□□□□□ -1.84
CHD2-212ENST00000627622 P0C880 135 aa3.53□□□□□ -1.84
CHD2-212ENST00000627622 CAMK2N1Q7Z7J9 78 aa3.52□□□□□ -1.85
CHD2-212ENST00000627622 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
CHD2-212ENST00000627622 H3BPC8 53 aa3.5□□□□□ -1.85
CHD2-212ENST00000627622 R4GN34 69 aa3.5□□□□□ -1.85
CHD2-212ENST00000627622 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
CHD2-212ENST00000627622 H0Y9P7 68 aa3.46□□□□□ -1.86
CHD2-212ENST00000627622 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
CHD2-212ENST00000627622 SPATA8Q6RVD6 105 aa3.46□□□□□ -1.86
CHD2-212ENST00000627622 M0QZ58 72 aa3.45□□□□□ -1.86
CHD2-212ENST00000627622 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
CHD2-212ENST00000627622 DMAC1Q96GE9 116 aa3.44□□□□□ -1.86
CHD2-212ENST00000627622 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
CHD2-212ENST00000627622 UQCR11O14957 56 aa3.41□□□□□ -1.86
CHD2-212ENST00000627622 COA5Q86WW8 74 aa3.41□□□□□ -1.86
CHD2-212ENST00000627622 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
CHD2-212ENST00000627622 GPR98Q8WXG9 6306 aa3.4□□□□□ -1.87
CHD2-212ENST00000627622 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
CHD2-212ENST00000627622 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
CHD2-212ENST00000627622 A0A1B0GU33 70 aa3.27□□□□□ -1.89
CHD2-212ENST00000627622 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
CHD2-212ENST00000627622 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
CHD2-212ENST00000627622 A0A1B0GU69 56 aa3.24□□□□□ -1.89
CHD2-212ENST00000627622 MT1EP04732 61 aa3.24□□□□□ -1.89
CHD2-212ENST00000627622 SPINT4Q6UDR6 99 aa3.22□□□□□ -1.89
CHD2-212ENST00000627622 MT4P47944 62 aa3.2□□□□□ -1.9
CHD2-212ENST00000627622 MT1GP13640 62 aa3.17□□□□□ -1.9
CHD2-212ENST00000627622 ACYP2P14621 99 aa3.17□□□□□ -1.9
CHD2-212ENST00000627622 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
CHD2-212ENST00000627622 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
CHD2-212ENST00000627622 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
CHD2-212ENST00000627622 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
CHD2-212ENST00000627622 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
CHD2-212ENST00000627622 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
CHD2-212ENST00000627622 KRTAP13-4Q3LI77 160 aa3.12□□□□□ -1.91
CHD2-212ENST00000627622 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
CHD2-212ENST00000627622 MT1MQ8N339 61 aa3.1□□□□□ -1.91
CHD2-212ENST00000627622 A0A0D9SG42 100 aa3.1□□□□□ -1.91
CHD2-212ENST00000627622 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
CHD2-212ENST00000627622 MT1LQ93083 61 aa3.06□□□□□ -1.92
CHD2-212ENST00000627622 INE1O15225 51 aa2.95□□□□□ -1.94
CHD2-212ENST00000627622 C10orf95Q9H7T3 257 aa2.95□□□□□ -1.94
CHD2-212ENST00000627622 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
CHD2-212ENST00000627622 KRTAP12-1P59990 96 aa2.93□□□□□ -1.94
CHD2-212ENST00000627622 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
CHD2-212ENST00000627622 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
CHD2-212ENST00000627622 TNP1P09430 55 aa2.87□□□□□ -1.95
CHD2-212ENST00000627622 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
CHD2-212ENST00000627622 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
CHD2-212ENST00000627622 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
CHD2-212ENST00000627622 MT3P25713 68 aa2.81□□□□□ -1.96
CHD2-212ENST00000627622 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
CHD2-212ENST00000627622 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
CHD2-212ENST00000627622 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
CHD2-212ENST00000627622 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
CHD2-212ENST00000627622 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
CHD2-212ENST00000627622 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
CHD2-212ENST00000627622 MT1AP04731 61 aa2.59□□□□□ -1.99
CHD2-212ENST00000627622 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
CHD2-212ENST00000627622 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
CHD2-212ENST00000627622 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
CHD2-212ENST00000627622 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
CHD2-212ENST00000627622 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
CHD2-212ENST00000627622 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
CHD2-212ENST00000627622 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
CHD2-212ENST00000627622 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
CHD2-212ENST00000627622 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
CHD2-212ENST00000627622 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.13
CHD2-212ENST00000627622 PRM1P04553 51 aa1.6□□□□□ -2.15
CHD2-212ENST00000627622 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.18
CHD2-212ENST00000627622 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms