RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
PNKP-221ENST00000627317 BRK1Q8WUW1 75 aa5.46□□□□□ -1.54
PNKP-221ENST00000627317 MT1EP04732 61 aa5.44□□□□□ -1.54
PNKP-221ENST00000627317 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
PNKP-221ENST00000627317 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
PNKP-221ENST00000627317 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
PNKP-221ENST00000627317 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
PNKP-221ENST00000627317 GPR98Q8WXG9 6306 aa5.31□□□□□ -1.56
PNKP-221ENST00000627317 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
PNKP-221ENST00000627317 MT1LQ93083 61 aa5.25□□□□□ -1.57
PNKP-221ENST00000627317 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
PNKP-221ENST00000627317 MT1GP13640 62 aa5.22□□□□□ -1.57
PNKP-221ENST00000627317 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
PNKP-221ENST00000627317 MT1MQ8N339 61 aa5.15□□□□□ -1.59
PNKP-221ENST00000627317 PMAIP1Q13794 54 aa5.14□□□□□ -1.59
PNKP-221ENST00000627317 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
PNKP-221ENST00000627317 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
PNKP-221ENST00000627317 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
PNKP-221ENST00000627317 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
PNKP-221ENST00000627317 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
PNKP-221ENST00000627317 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
PNKP-221ENST00000627317 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
PNKP-221ENST00000627317 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
PNKP-221ENST00000627317 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
PNKP-221ENST00000627317 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
PNKP-221ENST00000627317 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
PNKP-221ENST00000627317 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
PNKP-221ENST00000627317 MT4P47944 62 aa4.86□□□□□ -1.63
PNKP-221ENST00000627317 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
PNKP-221ENST00000627317 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
PNKP-221ENST00000627317 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
PNKP-221ENST00000627317 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
PNKP-221ENST00000627317 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
PNKP-221ENST00000627317 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
PNKP-221ENST00000627317 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
PNKP-221ENST00000627317 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
PNKP-221ENST00000627317 SPRR5A0A1B0GTR4 108 aa4.59□□□□□ -1.67
PNKP-221ENST00000627317 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
PNKP-221ENST00000627317 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
PNKP-221ENST00000627317 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
PNKP-221ENST00000627317 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
PNKP-221ENST00000627317 MT1AP04731 61 aa4.48□□□□□ -1.69
PNKP-221ENST00000627317 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
PNKP-221ENST00000627317 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
PNKP-221ENST00000627317 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
PNKP-221ENST00000627317 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
PNKP-221ENST00000627317 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
PNKP-221ENST00000627317 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
PNKP-221ENST00000627317 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
PNKP-221ENST00000627317 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
PNKP-221ENST00000627317 MT3P25713 68 aa4.08□□□□□ -1.76
PNKP-221ENST00000627317 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
PNKP-221ENST00000627317 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
PNKP-221ENST00000627317 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
PNKP-221ENST00000627317 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
PNKP-221ENST00000627317 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
PNKP-221ENST00000627317 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
PNKP-221ENST00000627317 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
PNKP-221ENST00000627317 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
PNKP-221ENST00000627317 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
PNKP-221ENST00000627317 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
PNKP-221ENST00000627317 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
PNKP-221ENST00000627317 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
PNKP-221ENST00000627317 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
PNKP-221ENST00000627317 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
PNKP-221ENST00000627317 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
PNKP-221ENST00000627317 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
PNKP-221ENST00000627317 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
PNKP-221ENST00000627317 H3BS24 57 aa3.07□□□□□ -1.92
PNKP-221ENST00000627317 LCE1FQ5T754 118 aa3□□□□□ -1.93
PNKP-221ENST00000627317 INE1O15225 51 aa2.96□□□□□ -1.94
PNKP-221ENST00000627317 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
PNKP-221ENST00000627317 PRM1P04553 51 aa2.82□□□□□ -1.96
PNKP-221ENST00000627317 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
PNKP-221ENST00000627317 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
PNKP-221ENST00000627317 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
PNKP-221ENST00000627317 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
PNKP-221ENST00000627317 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 177.5 ms