RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 TNP1P09430 55 aa3.1□□□□□ -1.91
PTP4A1-206ENST00000627002 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
PTP4A1-206ENST00000627002 SVIPQ8NHG7 77 aa3.07□□□□□ -1.92
PTP4A1-206ENST00000627002 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
PTP4A1-206ENST00000627002 NEBP20929 6669 aa3.06□□□□□ -1.92
PTP4A1-206ENST00000627002 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
PTP4A1-206ENST00000627002 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
PTP4A1-206ENST00000627002 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
PTP4A1-206ENST00000627002 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
PTP4A1-206ENST00000627002 KRTAP10-12P60413 245 aa2.98□□□□□ -1.93
PTP4A1-206ENST00000627002 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
PTP4A1-206ENST00000627002 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
PTP4A1-206ENST00000627002 LCE3AQ5TA76 89 aa2.94□□□□□ -1.94
PTP4A1-206ENST00000627002 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.95
PTP4A1-206ENST00000627002 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.95
PTP4A1-206ENST00000627002 KRTAP8-1Q8IUC2 63 aa2.89□□□□□ -1.95
PTP4A1-206ENST00000627002 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
PTP4A1-206ENST00000627002 KRTAP12-3P60328 96 aa2.84□□□□□ -1.95
PTP4A1-206ENST00000627002 KMT2DO14686 5537 aa2.84□□□□□ -1.96
PTP4A1-206ENST00000627002 MDN1Q9NU22 5596 aa2.84□□□□□ -1.96
PTP4A1-206ENST00000627002 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
PTP4A1-206ENST00000627002 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
PTP4A1-206ENST00000627002 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
PTP4A1-206ENST00000627002 SPRR2EP22531 72 aa2.79□□□□□ -1.96
PTP4A1-206ENST00000627002 SPRR2BP35325 72 aa2.79□□□□□ -1.96
PTP4A1-206ENST00000627002 SPRR2AP35326 72 aa2.79□□□□□ -1.96
PTP4A1-206ENST00000627002 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
PTP4A1-206ENST00000627002 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
PTP4A1-206ENST00000627002 MT1EP04732 61 aa2.74□□□□□ -1.97
PTP4A1-206ENST00000627002 SPRR2DP22532 72 aa2.71□□□□□ -1.98
PTP4A1-206ENST00000627002 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
PTP4A1-206ENST00000627002 MT3P25713 68 aa2.7□□□□□ -1.98
PTP4A1-206ENST00000627002 MT1LQ93083 61 aa2.69□□□□□ -1.98
PTP4A1-206ENST00000627002 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.99
PTP4A1-206ENST00000627002 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
PTP4A1-206ENST00000627002 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
PTP4A1-206ENST00000627002 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
PTP4A1-206ENST00000627002 MT1GP13640 62 aa2.63□□□□□ -1.99
PTP4A1-206ENST00000627002 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
PTP4A1-206ENST00000627002 MT1MQ8N339 61 aa2.58□□□□□ -2
PTP4A1-206ENST00000627002 LUZP6Q538Z0 58 aa2.57□□□□□ -2
PTP4A1-206ENST00000627002 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
PTP4A1-206ENST00000627002 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
PTP4A1-206ENST00000627002 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
PTP4A1-206ENST00000627002 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
PTP4A1-206ENST00000627002 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
PTP4A1-206ENST00000627002 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
PTP4A1-206ENST00000627002 NDUFAF8A1L188 74 aa2.45□□□□□ -2.02
PTP4A1-206ENST00000627002 MT4P47944 62 aa2.38□□□□□ -2.03
PTP4A1-206ENST00000627002 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
PTP4A1-206ENST00000627002 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
PTP4A1-206ENST00000627002 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
PTP4A1-206ENST00000627002 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
PTP4A1-206ENST00000627002 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
PTP4A1-206ENST00000627002 MT1AP04731 61 aa2.29□□□□□ -2.04
PTP4A1-206ENST00000627002 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
PTP4A1-206ENST00000627002 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
PTP4A1-206ENST00000627002 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
PTP4A1-206ENST00000627002 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
PTP4A1-206ENST00000627002 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
PTP4A1-206ENST00000627002 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
PTP4A1-206ENST00000627002 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
PTP4A1-206ENST00000627002 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
PTP4A1-206ENST00000627002 INE1O15225 51 aa2.06□□□□□ -2.08
PTP4A1-206ENST00000627002 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
PTP4A1-206ENST00000627002 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
PTP4A1-206ENST00000627002 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
PTP4A1-206ENST00000627002 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
PTP4A1-206ENST00000627002 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
PTP4A1-206ENST00000627002 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
PTP4A1-206ENST00000627002 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
PTP4A1-206ENST00000627002 PRM1P04553 51 aa1.66□□□□□ -2.14
PTP4A1-206ENST00000627002 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
PTP4A1-206ENST00000627002 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
PTP4A1-206ENST00000627002 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
PTP4A1-206ENST00000627002 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
PTP4A1-206ENST00000627002 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 69.1 ms