RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 MT1LQ93083 61 aa3.44□□□□□ -1.86
SRGAP2-217ENST00000624873 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
SRGAP2-217ENST00000624873 LCE3BQ5TA77 95 aa3.37□□□□□ -1.87
SRGAP2-217ENST00000624873 MT1MQ8N339 61 aa3.35□□□□□ -1.87
SRGAP2-217ENST00000624873 MUC2Q02817 5179 aa3.35□□□□□ -1.87
SRGAP2-217ENST00000624873 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
SRGAP2-217ENST00000624873 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
SRGAP2-217ENST00000624873 KRTAP4-7Q9BYR0 210 aa3.3□□□□□ -1.88
SRGAP2-217ENST00000624873 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
SRGAP2-217ENST00000624873 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
SRGAP2-217ENST00000624873 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
SRGAP2-217ENST00000624873 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
SRGAP2-217ENST00000624873 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
SRGAP2-217ENST00000624873 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
SRGAP2-217ENST00000624873 MT4P47944 62 aa3.23□□□□□ -1.89
SRGAP2-217ENST00000624873 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
SRGAP2-217ENST00000624873 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
SRGAP2-217ENST00000624873 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
SRGAP2-217ENST00000624873 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
SRGAP2-217ENST00000624873 MT3P25713 68 aa3.16□□□□□ -1.9
SRGAP2-217ENST00000624873 USH2AO75445 5202 aa3.14□□□□□ -1.91
SRGAP2-217ENST00000624873 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
SRGAP2-217ENST00000624873 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
SRGAP2-217ENST00000624873 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
SRGAP2-217ENST00000624873 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
SRGAP2-217ENST00000624873 MT1AP04731 61 aa3.08□□□□□ -1.92
SRGAP2-217ENST00000624873 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
SRGAP2-217ENST00000624873 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
SRGAP2-217ENST00000624873 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
SRGAP2-217ENST00000624873 FCGBPQ9Y6R7 5405 aaPredicted RBP2.96□□□□□ -1.94
SRGAP2-217ENST00000624873 MACF1Q9UPN3 7388 aaKnown RBP2.95□□□□□ -1.94
SRGAP2-217ENST00000624873 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
SRGAP2-217ENST00000624873 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
SRGAP2-217ENST00000624873 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
SRGAP2-217ENST00000624873 KRTAP4-9Q9BYQ8 210 aa2.92□□□□□ -1.94
SRGAP2-217ENST00000624873 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
SRGAP2-217ENST00000624873 KMT2DO14686 5537 aa2.91□□□□□ -1.94
SRGAP2-217ENST00000624873 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
SRGAP2-217ENST00000624873 NEBP20929 6669 aa2.88□□□□□ -1.95
SRGAP2-217ENST00000624873 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
SRGAP2-217ENST00000624873 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
SRGAP2-217ENST00000624873 KRTAP9-4Q9BYQ2 154 aa2.84□□□□□ -1.95
SRGAP2-217ENST00000624873 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
SRGAP2-217ENST00000624873 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
SRGAP2-217ENST00000624873 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
SRGAP2-217ENST00000624873 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
SRGAP2-217ENST00000624873 PRM1P04553 51 aa2.68□□□□□ -1.98
SRGAP2-217ENST00000624873 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
SRGAP2-217ENST00000624873 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
SRGAP2-217ENST00000624873 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
SRGAP2-217ENST00000624873 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
SRGAP2-217ENST00000624873 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
SRGAP2-217ENST00000624873 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
SRGAP2-217ENST00000624873 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
SRGAP2-217ENST00000624873 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
SRGAP2-217ENST00000624873 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
SRGAP2-217ENST00000624873 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
SRGAP2-217ENST00000624873 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
SRGAP2-217ENST00000624873 KRTAP4-11Q9BYQ6 195 aa2.34□□□□□ -2.03
SRGAP2-217ENST00000624873 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SRGAP2-217ENST00000624873 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
SRGAP2-217ENST00000624873 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
SRGAP2-217ENST00000624873 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
SRGAP2-217ENST00000624873 KRTAP5-2Q701N4 177 aa2.02□□□□□ -2.09
SRGAP2-217ENST00000624873 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
SRGAP2-217ENST00000624873 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
SRGAP2-217ENST00000624873 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
SRGAP2-217ENST00000624873 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
SRGAP2-217ENST00000624873 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.13
SRGAP2-217ENST00000624873 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
SRGAP2-217ENST00000624873 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
SRGAP2-217ENST00000624873 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
SRGAP2-217ENST00000624873 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
SRGAP2-217ENST00000624873 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
SRGAP2-217ENST00000624873 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
SRGAP2-217ENST00000624873 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
SRGAP2-217ENST00000624873 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 66.1 ms