RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
ATRX-216ENST00000624403 USH2AO75445 5202 aa4.24□□□□□ -1.73
ATRX-216ENST00000624403 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
ATRX-216ENST00000624403 TNP1P09430 55 aa4.22□□□□□ -1.73
ATRX-216ENST00000624403 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
ATRX-216ENST00000624403 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
ATRX-216ENST00000624403 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.74
ATRX-216ENST00000624403 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
ATRX-216ENST00000624403 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
ATRX-216ENST00000624403 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
ATRX-216ENST00000624403 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
ATRX-216ENST00000624403 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
ATRX-216ENST00000624403 SSPOA2VEC9 5147 aa4.09□□□□□ -1.76
ATRX-216ENST00000624403 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
ATRX-216ENST00000624403 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
ATRX-216ENST00000624403 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.78
ATRX-216ENST00000624403 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
ATRX-216ENST00000624403 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
ATRX-216ENST00000624403 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
ATRX-216ENST00000624403 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
ATRX-216ENST00000624403 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
ATRX-216ENST00000624403 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
ATRX-216ENST00000624403 KMT2DO14686 5537 aa3.84□□□□□ -1.79
ATRX-216ENST00000624403 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
ATRX-216ENST00000624403 MT1EP04732 61 aa3.75□□□□□ -1.81
ATRX-216ENST00000624403 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
ATRX-216ENST00000624403 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
ATRX-216ENST00000624403 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
ATRX-216ENST00000624403 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
ATRX-216ENST00000624403 MT1LQ93083 61 aa3.67□□□□□ -1.82
ATRX-216ENST00000624403 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
ATRX-216ENST00000624403 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
ATRX-216ENST00000624403 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
ATRX-216ENST00000624403 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
ATRX-216ENST00000624403 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
ATRX-216ENST00000624403 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
ATRX-216ENST00000624403 MT1GP13640 62 aa3.54□□□□□ -1.84
ATRX-216ENST00000624403 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
ATRX-216ENST00000624403 MT1MQ8N339 61 aa3.53□□□□□ -1.84
ATRX-216ENST00000624403 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
ATRX-216ENST00000624403 SPRR2EP22531 72 aa3.46□□□□□ -1.86
ATRX-216ENST00000624403 SPRR2BP35325 72 aa3.46□□□□□ -1.86
ATRX-216ENST00000624403 SPRR2AP35326 72 aa3.46□□□□□ -1.86
ATRX-216ENST00000624403 MDN1Q9NU22 5596 aa3.41□□□□□ -1.86
ATRX-216ENST00000624403 SPRR2DP22532 72 aa3.33□□□□□ -1.88
ATRX-216ENST00000624403 NEBP20929 6669 aa3.32□□□□□ -1.88
ATRX-216ENST00000624403 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
ATRX-216ENST00000624403 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
ATRX-216ENST00000624403 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
ATRX-216ENST00000624403 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
ATRX-216ENST00000624403 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
ATRX-216ENST00000624403 MT1AP04731 61 aa3.12□□□□□ -1.91
ATRX-216ENST00000624403 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
ATRX-216ENST00000624403 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
ATRX-216ENST00000624403 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
ATRX-216ENST00000624403 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
ATRX-216ENST00000624403 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
ATRX-216ENST00000624403 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
ATRX-216ENST00000624403 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.94
ATRX-216ENST00000624403 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
ATRX-216ENST00000624403 MT4P47944 62 aa2.89□□□□□ -1.95
ATRX-216ENST00000624403 INE1O15225 51 aa2.86□□□□□ -1.95
ATRX-216ENST00000624403 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
ATRX-216ENST00000624403 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
ATRX-216ENST00000624403 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
ATRX-216ENST00000624403 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
ATRX-216ENST00000624403 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
ATRX-216ENST00000624403 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
ATRX-216ENST00000624403 PRM1P04553 51 aa2.34□□□□□ -2.03
ATRX-216ENST00000624403 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
ATRX-216ENST00000624403 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
ATRX-216ENST00000624403 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
ATRX-216ENST00000624403 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
ATRX-216ENST00000624403 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
ATRX-216ENST00000624403 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
ATRX-216ENST00000624403 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
ATRX-216ENST00000624403 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
ATRX-216ENST00000624403 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms