RNA–Protein interactions for RNA: ENST00000623368.3

FDFT1-226, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-226ENST00000623368 KRTAP19-6Q3LI70 58 aa6.5□□□□□ -1.37
FDFT1-226ENST00000623368 KRTAP9-6A0A140TA67 174 aa6.49□□□□□ -1.37
FDFT1-226ENST00000623368 MT1LQ93083 61 aa6.46□□□□□ -1.37
FDFT1-226ENST00000623368 MT1EP04732 61 aa6.44□□□□□ -1.38
FDFT1-226ENST00000623368 FCGBPQ9Y6R7 5405 aaPredicted RBP6.38□□□□□ -1.39
FDFT1-226ENST00000623368 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
FDFT1-226ENST00000623368 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
FDFT1-226ENST00000623368 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.42
FDFT1-226ENST00000623368 LOC100996750A0A140TA64 210 aa6.08□□□□□ -1.44
FDFT1-226ENST00000623368 KRTAP4-3Q9BYR4 195 aa6.07□□□□□ -1.44
FDFT1-226ENST00000623368 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
FDFT1-226ENST00000623368 MUC12Q9UKN1 5478 aa6.05□□□□□ -1.44
FDFT1-226ENST00000623368 KRTAP19-3Q7Z4W3 81 aa6.04□□□□□ -1.44
FDFT1-226ENST00000623368 MT1GP13640 62 aa6.03□□□□□ -1.44
FDFT1-226ENST00000623368 MT1MQ8N339 61 aa6.03□□□□□ -1.44
FDFT1-226ENST00000623368 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
FDFT1-226ENST00000623368 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
FDFT1-226ENST00000623368 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
FDFT1-226ENST00000623368 KRTAP6-3Q3LI67 103 aa5.73□□□□□ -1.49
FDFT1-226ENST00000623368 MT1AP04731 61 aa5.72□□□□□ -1.49
FDFT1-226ENST00000623368 KRTAP2-2Q9BYT5 123 aa5.71□□□□□ -1.5
FDFT1-226ENST00000623368 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
FDFT1-226ENST00000623368 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
FDFT1-226ENST00000623368 PRM1P04553 51 aa5.68□□□□□ -1.5
FDFT1-226ENST00000623368 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
FDFT1-226ENST00000623368 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
FDFT1-226ENST00000623368 KRTAP5-5Q701N2 237 aaPredicted RBP5.59□□□□□ -1.51
FDFT1-226ENST00000623368 KRTAP5-9P26371 169 aa5.58□□□□□ -1.52
FDFT1-226ENST00000623368 LCE1AQ5T7P2 110 aa5.56□□□□□ -1.52
FDFT1-226ENST00000623368 LCE3DQ9BYE3 92 aa5.55□□□□□ -1.52
FDFT1-226ENST00000623368 LCE3EQ5T5B0 92 aa5.53□□□□□ -1.52
FDFT1-226ENST00000623368 NEBP20929 6669 aa5.5□□□□□ -1.53
FDFT1-226ENST00000623368 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
FDFT1-226ENST00000623368 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
FDFT1-226ENST00000623368 SPRR2EP22531 72 aa5.41□□□□□ -1.54
FDFT1-226ENST00000623368 SPRR2BP35325 72 aa5.41□□□□□ -1.54
FDFT1-226ENST00000623368 SPRR2AP35326 72 aa5.41□□□□□ -1.54
FDFT1-226ENST00000623368 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.57
FDFT1-226ENST00000623368 SPRR2DP22532 72 aa5.18□□□□□ -1.58
FDFT1-226ENST00000623368 LCE1EQ5T753 118 aa5.15□□□□□ -1.58
FDFT1-226ENST00000623368 KRTAP20-1Q3LI63 56 aa5.14□□□□□ -1.59
FDFT1-226ENST00000623368 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
FDFT1-226ENST00000623368 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
FDFT1-226ENST00000623368 MT3P25713 68 aa4.86□□□□□ -1.63
FDFT1-226ENST00000623368 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
FDFT1-226ENST00000623368 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
FDFT1-226ENST00000623368 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
FDFT1-226ENST00000623368 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
FDFT1-226ENST00000623368 MT4P47944 62 aa4.58□□□□□ -1.68
FDFT1-226ENST00000623368 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
FDFT1-226ENST00000623368 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
FDFT1-226ENST00000623368 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
FDFT1-226ENST00000623368 LCE1FQ5T754 118 aa4.34□□□□□ -1.72
FDFT1-226ENST00000623368 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
FDFT1-226ENST00000623368 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
FDFT1-226ENST00000623368 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
FDFT1-226ENST00000623368 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
FDFT1-226ENST00000623368 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
FDFT1-226ENST00000623368 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
FDFT1-226ENST00000623368 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.78
FDFT1-226ENST00000623368 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
FDFT1-226ENST00000623368 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
FDFT1-226ENST00000623368 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
FDFT1-226ENST00000623368 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
FDFT1-226ENST00000623368 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
FDFT1-226ENST00000623368 KRTAP21-1Q3LI58 79 aa3.71□□□□□ -1.82
FDFT1-226ENST00000623368 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
FDFT1-226ENST00000623368 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
FDFT1-226ENST00000623368 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
FDFT1-226ENST00000623368 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
FDFT1-226ENST00000623368 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
FDFT1-226ENST00000623368 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
FDFT1-226ENST00000623368 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
FDFT1-226ENST00000623368 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
FDFT1-226ENST00000623368 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
FDFT1-226ENST00000623368 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
FDFT1-226ENST00000623368 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms