RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 MT1BP07438 61 aa2.85□□□□□ -1.95
VPS11-209ENST00000622309 KRTAP2-3P0C7H8 128 aa2.85□□□□□ -1.95
VPS11-209ENST00000622309 KRTAP2-4Q9BYR9 128 aa2.85□□□□□ -1.95
VPS11-209ENST00000622309 KRTAP2-1Q9BYU5 128 aa2.85□□□□□ -1.95
VPS11-209ENST00000622309 NEBP20929 6669 aa2.84□□□□□ -1.95
VPS11-209ENST00000622309 KMT2DO14686 5537 aa2.83□□□□□ -1.96
VPS11-209ENST00000622309 KRTAP19-8Q3LI54 63 aa2.82□□□□□ -1.96
VPS11-209ENST00000622309 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
VPS11-209ENST00000622309 MT1XP80297 61 aa2.81□□□□□ -1.96
VPS11-209ENST00000622309 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
VPS11-209ENST00000622309 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
VPS11-209ENST00000622309 LCE1DQ5T752 114 aa2.8□□□□□ -1.96
VPS11-209ENST00000622309 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
VPS11-209ENST00000622309 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
VPS11-209ENST00000622309 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
VPS11-209ENST00000622309 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
VPS11-209ENST00000622309 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
VPS11-209ENST00000622309 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
VPS11-209ENST00000622309 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
VPS11-209ENST00000622309 KRTAP4-8A0A0G2JLE6 195 aa2.67□□□□□ -1.98
VPS11-209ENST00000622309 KRTAP4-8Q9BYQ9 185 aa2.67□□□□□ -1.98
VPS11-209ENST00000622309 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
VPS11-209ENST00000622309 KRTAP4-7Q9BYR0 210 aa2.63□□□□□ -1.99
VPS11-209ENST00000622309 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
VPS11-209ENST00000622309 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
VPS11-209ENST00000622309 SPRR2EP22531 72 aa2.58□□□□□ -2
VPS11-209ENST00000622309 SPRR2BP35325 72 aa2.58□□□□□ -2
VPS11-209ENST00000622309 SPRR2AP35326 72 aa2.58□□□□□ -2
VPS11-209ENST00000622309 LCE4AQ5TA78 99 aa2.55□□□□□ -2
VPS11-209ENST00000622309 KRTAP19-4Q3LI73 84 aa2.55□□□□□ -2
VPS11-209ENST00000622309 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
VPS11-209ENST00000622309 SPRR2FQ96RM1 72 aa2.53□□□□□ -2
VPS11-209ENST00000622309 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
VPS11-209ENST00000622309 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
VPS11-209ENST00000622309 SPRR2DP22532 72 aa2.5□□□□□ -2.01
VPS11-209ENST00000622309 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
VPS11-209ENST00000622309 MT1LQ93083 61 aa2.47□□□□□ -2.01
VPS11-209ENST00000622309 LCE3BQ5TA77 95 aa2.45□□□□□ -2.02
VPS11-209ENST00000622309 PRM1P04553 51 aa2.44□□□□□ -2.02
VPS11-209ENST00000622309 MT1EP04732 61 aa2.43□□□□□ -2.02
VPS11-209ENST00000622309 LOC100996750A0A140TA64 210 aa2.43□□□□□ -2.02
VPS11-209ENST00000622309 KRTAP4-3Q9BYR4 195 aa2.43□□□□□ -2.02
VPS11-209ENST00000622309 MT1GP13640 62 aa2.4□□□□□ -2.03
VPS11-209ENST00000622309 KRTAP4-9Q9BYQ8 210 aa2.35□□□□□ -2.03
VPS11-209ENST00000622309 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
VPS11-209ENST00000622309 KRTAP19-3Q7Z4W3 81 aa2.3□□□□□ -2.04
VPS11-209ENST00000622309 MT1AP04731 61 aa2.29□□□□□ -2.04
VPS11-209ENST00000622309 MT1MQ8N339 61 aa2.29□□□□□ -2.04
VPS11-209ENST00000622309 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
VPS11-209ENST00000622309 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
VPS11-209ENST00000622309 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
VPS11-209ENST00000622309 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
VPS11-209ENST00000622309 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
VPS11-209ENST00000622309 MT3P25713 68 aa2.19□□□□□ -2.06
VPS11-209ENST00000622309 MT4P47944 62 aa2.17□□□□□ -2.06
VPS11-209ENST00000622309 KRTAP5-3Q6L8H2 238 aa2.12□□□□□ -2.07
VPS11-209ENST00000622309 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
VPS11-209ENST00000622309 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.08
VPS11-209ENST00000622309 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
VPS11-209ENST00000622309 KRTAP4-6Q9BYQ5 205 aa2.06□□□□□ -2.08
VPS11-209ENST00000622309 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
VPS11-209ENST00000622309 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
VPS11-209ENST00000622309 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
VPS11-209ENST00000622309 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
VPS11-209ENST00000622309 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
VPS11-209ENST00000622309 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
VPS11-209ENST00000622309 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
VPS11-209ENST00000622309 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
VPS11-209ENST00000622309 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
VPS11-209ENST00000622309 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
VPS11-209ENST00000622309 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
VPS11-209ENST00000622309 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
VPS11-209ENST00000622309 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
VPS11-209ENST00000622309 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.2
VPS11-209ENST00000622309 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
VPS11-209ENST00000622309 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
VPS11-209ENST00000622309 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.25□□□□□ -2.21
VPS11-209ENST00000622309 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 78.8 ms