RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
SCAMP1-207ENST00000621999 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
SCAMP1-207ENST00000621999 MT1GP13640 62 aa4.38□□□□□ -1.71
SCAMP1-207ENST00000621999 SPRR2DP22532 72 aa4.38□□□□□ -1.71
SCAMP1-207ENST00000621999 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
SCAMP1-207ENST00000621999 MT1LQ93083 61 aa4.35□□□□□ -1.71
SCAMP1-207ENST00000621999 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
SCAMP1-207ENST00000621999 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
SCAMP1-207ENST00000621999 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
SCAMP1-207ENST00000621999 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
SCAMP1-207ENST00000621999 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
SCAMP1-207ENST00000621999 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
SCAMP1-207ENST00000621999 MT1MQ8N339 61 aa4.22□□□□□ -1.73
SCAMP1-207ENST00000621999 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
SCAMP1-207ENST00000621999 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
SCAMP1-207ENST00000621999 LCE3BQ5TA77 95 aa4.09□□□□□ -1.75
SCAMP1-207ENST00000621999 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
SCAMP1-207ENST00000621999 H3BS24 57 aa4.08□□□□□ -1.76
SCAMP1-207ENST00000621999 LCE5AQ5TCM9 118 aa4.08□□□□□ -1.76
SCAMP1-207ENST00000621999 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
SCAMP1-207ENST00000621999 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
SCAMP1-207ENST00000621999 MDN1Q9NU22 5596 aa4.03□□□□□ -1.76
SCAMP1-207ENST00000621999 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
SCAMP1-207ENST00000621999 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
SCAMP1-207ENST00000621999 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
SCAMP1-207ENST00000621999 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
SCAMP1-207ENST00000621999 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
SCAMP1-207ENST00000621999 MT4P47944 62 aa3.9□□□□□ -1.78
SCAMP1-207ENST00000621999 NEBP20929 6669 aa3.9□□□□□ -1.79
SCAMP1-207ENST00000621999 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
SCAMP1-207ENST00000621999 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
SCAMP1-207ENST00000621999 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
SCAMP1-207ENST00000621999 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
SCAMP1-207ENST00000621999 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
SCAMP1-207ENST00000621999 MT1AP04731 61 aa3.73□□□□□ -1.81
SCAMP1-207ENST00000621999 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
SCAMP1-207ENST00000621999 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
SCAMP1-207ENST00000621999 INE1O15225 51 aa3.6□□□□□ -1.83
SCAMP1-207ENST00000621999 MT3P25713 68 aa3.59□□□□□ -1.83
SCAMP1-207ENST00000621999 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
SCAMP1-207ENST00000621999 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
SCAMP1-207ENST00000621999 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
SCAMP1-207ENST00000621999 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
SCAMP1-207ENST00000621999 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
SCAMP1-207ENST00000621999 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.86
SCAMP1-207ENST00000621999 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
SCAMP1-207ENST00000621999 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
SCAMP1-207ENST00000621999 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
SCAMP1-207ENST00000621999 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
SCAMP1-207ENST00000621999 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
SCAMP1-207ENST00000621999 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
SCAMP1-207ENST00000621999 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
SCAMP1-207ENST00000621999 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
SCAMP1-207ENST00000621999 PRM1P04553 51 aa2.97□□□□□ -1.93
SCAMP1-207ENST00000621999 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
SCAMP1-207ENST00000621999 MUC5ACP98088 5654 aa2.9□□□□□ -1.94
SCAMP1-207ENST00000621999 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
SCAMP1-207ENST00000621999 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
SCAMP1-207ENST00000621999 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
SCAMP1-207ENST00000621999 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
SCAMP1-207ENST00000621999 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
SCAMP1-207ENST00000621999 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
SCAMP1-207ENST00000621999 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
SCAMP1-207ENST00000621999 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
SCAMP1-207ENST00000621999 LCE1CQ5T751 118 aa2.58□□□□□ -2
SCAMP1-207ENST00000621999 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
SCAMP1-207ENST00000621999 LCE1FQ5T754 118 aa2.54□□□□□ -2
SCAMP1-207ENST00000621999 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
SCAMP1-207ENST00000621999 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
SCAMP1-207ENST00000621999 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
SCAMP1-207ENST00000621999 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
SCAMP1-207ENST00000621999 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
SCAMP1-207ENST00000621999 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
SCAMP1-207ENST00000621999 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.05
SCAMP1-207ENST00000621999 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
SCAMP1-207ENST00000621999 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
SCAMP1-207ENST00000621999 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms