RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 KRTAP4-8Q9BYQ9 185 aa2.26□□□□□ -2.05
FMR1-217ENST00000620828 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
FMR1-217ENST00000620828 MT3P25713 68 aa2.26□□□□□ -2.05
FMR1-217ENST00000620828 M0QZ58 72 aa2.23□□□□□ -2.05
FMR1-217ENST00000620828 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
FMR1-217ENST00000620828 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
FMR1-217ENST00000620828 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
FMR1-217ENST00000620828 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
FMR1-217ENST00000620828 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
FMR1-217ENST00000620828 KRTAP8-1Q8IUC2 63 aa2.19□□□□□ -2.06
FMR1-217ENST00000620828 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
FMR1-217ENST00000620828 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
FMR1-217ENST00000620828 SPRR2EP22531 72 aa2.17□□□□□ -2.06
FMR1-217ENST00000620828 SPRR2BP35325 72 aa2.17□□□□□ -2.06
FMR1-217ENST00000620828 SPRR2AP35326 72 aa2.17□□□□□ -2.06
FMR1-217ENST00000620828 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
FMR1-217ENST00000620828 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
FMR1-217ENST00000620828 MT1EP04732 61 aa2.15□□□□□ -2.06
FMR1-217ENST00000620828 KRTAP2-2Q9BYT5 123 aa2.14□□□□□ -2.07
FMR1-217ENST00000620828 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
FMR1-217ENST00000620828 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
FMR1-217ENST00000620828 LCE3BQ5TA77 95 aa2.12□□□□□ -2.07
FMR1-217ENST00000620828 SPRR2DP22532 72 aa2.11□□□□□ -2.07
FMR1-217ENST00000620828 TNP1P09430 55 aa2.1□□□□□ -2.07
FMR1-217ENST00000620828 KRTAP19-3Q7Z4W3 81 aa2.09□□□□□ -2.07
FMR1-217ENST00000620828 LCE4AQ5TA78 99 aa2.08□□□□□ -2.08
FMR1-217ENST00000620828 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
FMR1-217ENST00000620828 MT1LQ93083 61 aa2.06□□□□□ -2.08
FMR1-217ENST00000620828 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
FMR1-217ENST00000620828 MT1GP13640 62 aa2.03□□□□□ -2.08
FMR1-217ENST00000620828 MT1MQ8N339 61 aa2.03□□□□□ -2.08
FMR1-217ENST00000620828 LOC100996750A0A140TA64 210 aa2.01□□□□□ -2.09
FMR1-217ENST00000620828 KRTAP4-6Q9BYQ5 205 aa2.01□□□□□ -2.09
FMR1-217ENST00000620828 LCE3AQ5TA76 89 aa2□□□□□ -2.09
FMR1-217ENST00000620828 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
FMR1-217ENST00000620828 KRTAP4-3Q9BYR4 195 aa1.96□□□□□ -2.1
FMR1-217ENST00000620828 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
FMR1-217ENST00000620828 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
FMR1-217ENST00000620828 LCE1DQ5T752 114 aa1.93□□□□□ -2.1
FMR1-217ENST00000620828 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
FMR1-217ENST00000620828 KRTAP4-7Q9BYR0 210 aa1.91□□□□□ -2.1
FMR1-217ENST00000620828 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
FMR1-217ENST00000620828 KRTAP4-9Q9BYQ8 210 aa1.9□□□□□ -2.11
FMR1-217ENST00000620828 KRTAP9-6A8MVA2 160 aa1.89□□□□□ -2.11
FMR1-217ENST00000620828 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
FMR1-217ENST00000620828 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
FMR1-217ENST00000620828 KRTAP4-12Q9BQ66 201 aa1.85□□□□□ -2.11
FMR1-217ENST00000620828 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.11
FMR1-217ENST00000620828 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.12
FMR1-217ENST00000620828 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
FMR1-217ENST00000620828 KRTAP9-9Q9BYP9 154 aa1.83□□□□□ -2.12
FMR1-217ENST00000620828 KRTAP9-4Q9BYQ2 154 aa1.83□□□□□ -2.12
FMR1-217ENST00000620828 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
FMR1-217ENST00000620828 MT4P47944 62 aa1.8□□□□□ -2.12
FMR1-217ENST00000620828 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
FMR1-217ENST00000620828 MT1AP04731 61 aa1.74□□□□□ -2.13
FMR1-217ENST00000620828 KRTAP6-1Q3LI64 71 aa1.73□□□□□ -2.13
FMR1-217ENST00000620828 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
FMR1-217ENST00000620828 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
FMR1-217ENST00000620828 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
FMR1-217ENST00000620828 KRTAP4-11Q9BYQ6 195 aa1.64□□□□□ -2.15
FMR1-217ENST00000620828 KRTAP4-2Q9BYR5 136 aa1.61□□□□□ -2.15
FMR1-217ENST00000620828 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
FMR1-217ENST00000620828 LCE1EQ5T753 118 aa1.6□□□□□ -2.15
FMR1-217ENST00000620828 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
FMR1-217ENST00000620828 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
FMR1-217ENST00000620828 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
FMR1-217ENST00000620828 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
FMR1-217ENST00000620828 PRM1P04553 51 aa1.41□□□□□ -2.18
FMR1-217ENST00000620828 LCE1CQ5T751 118 aa1.4□□□□□ -2.18
FMR1-217ENST00000620828 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.18
FMR1-217ENST00000620828 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
FMR1-217ENST00000620828 KRTAP5-11Q6L8G4 156 aa1.27□□□□□ -2.21
FMR1-217ENST00000620828 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
FMR1-217ENST00000620828 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
FMR1-217ENST00000620828 KRTAP4-4Q9BYR3 166 aa1.01□□□□□ -2.25
FMR1-217ENST00000620828 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
FMR1-217ENST00000620828 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 266.6 ms