RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 MT1EP04732 61 aa4.01□□□□□ -1.77
TARDBP-223ENST00000620632 TNP1P09430 55 aa4□□□□□ -1.77
TARDBP-223ENST00000620632 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
TARDBP-223ENST00000620632 SPRR2DP22532 72 aa3.99□□□□□ -1.77
TARDBP-223ENST00000620632 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
TARDBP-223ENST00000620632 KRTAP2-3P0C7H8 128 aa3.97□□□□□ -1.77
TARDBP-223ENST00000620632 KRTAP2-4Q9BYR9 128 aa3.97□□□□□ -1.77
TARDBP-223ENST00000620632 A6NED7 52 aa3.95□□□□□ -1.78
TARDBP-223ENST00000620632 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
TARDBP-223ENST00000620632 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
TARDBP-223ENST00000620632 K7ERS5 55 aa3.9□□□□□ -1.79
TARDBP-223ENST00000620632 SVIPQ8NHG7 77 aa3.9□□□□□ -1.79
TARDBP-223ENST00000620632 MT1LQ93083 61 aa3.86□□□□□ -1.79
TARDBP-223ENST00000620632 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
TARDBP-223ENST00000620632 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
TARDBP-223ENST00000620632 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
TARDBP-223ENST00000620632 MT1GP13640 62 aa3.83□□□□□ -1.8
TARDBP-223ENST00000620632 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
TARDBP-223ENST00000620632 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
TARDBP-223ENST00000620632 MT1MQ8N339 61 aa3.81□□□□□ -1.8
TARDBP-223ENST00000620632 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
TARDBP-223ENST00000620632 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
TARDBP-223ENST00000620632 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
TARDBP-223ENST00000620632 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
TARDBP-223ENST00000620632 ROMO1P60602 79 aa3.73□□□□□ -1.81
TARDBP-223ENST00000620632 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
TARDBP-223ENST00000620632 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
TARDBP-223ENST00000620632 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
TARDBP-223ENST00000620632 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
TARDBP-223ENST00000620632 BRK1Q8WUW1 75 aa3.58□□□□□ -1.84
TARDBP-223ENST00000620632 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
TARDBP-223ENST00000620632 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
TARDBP-223ENST00000620632 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
TARDBP-223ENST00000620632 MT4P47944 62 aa3.5□□□□□ -1.85
TARDBP-223ENST00000620632 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
TARDBP-223ENST00000620632 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
TARDBP-223ENST00000620632 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
TARDBP-223ENST00000620632 PMAIP1Q13794 54 aa3.35□□□□□ -1.87
TARDBP-223ENST00000620632 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
TARDBP-223ENST00000620632 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
TARDBP-223ENST00000620632 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
TARDBP-223ENST00000620632 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
TARDBP-223ENST00000620632 MT1AP04731 61 aa3.28□□□□□ -1.88
TARDBP-223ENST00000620632 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
TARDBP-223ENST00000620632 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
TARDBP-223ENST00000620632 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
TARDBP-223ENST00000620632 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
TARDBP-223ENST00000620632 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
TARDBP-223ENST00000620632 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
TARDBP-223ENST00000620632 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
TARDBP-223ENST00000620632 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
TARDBP-223ENST00000620632 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
TARDBP-223ENST00000620632 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
TARDBP-223ENST00000620632 MT3P25713 68 aa2.96□□□□□ -1.94
TARDBP-223ENST00000620632 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
TARDBP-223ENST00000620632 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
TARDBP-223ENST00000620632 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
TARDBP-223ENST00000620632 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
TARDBP-223ENST00000620632 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
TARDBP-223ENST00000620632 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
TARDBP-223ENST00000620632 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
TARDBP-223ENST00000620632 LUZP6Q538Z0 58 aa2.62□□□□□ -1.99
TARDBP-223ENST00000620632 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
TARDBP-223ENST00000620632 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
TARDBP-223ENST00000620632 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
TARDBP-223ENST00000620632 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
TARDBP-223ENST00000620632 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
TARDBP-223ENST00000620632 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
TARDBP-223ENST00000620632 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
TARDBP-223ENST00000620632 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
TARDBP-223ENST00000620632 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
TARDBP-223ENST00000620632 INE1O15225 51 aa2.15□□□□□ -2.07
TARDBP-223ENST00000620632 LCE1FQ5T754 118 aa2.12□□□□□ -2.07
TARDBP-223ENST00000620632 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
TARDBP-223ENST00000620632 PRM1P04553 51 aa1.95□□□□□ -2.1
TARDBP-223ENST00000620632 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
TARDBP-223ENST00000620632 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
TARDBP-223ENST00000620632 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 20.2 ms