RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -1.99
BRCC3-209ENST00000620502 ATP5EP56381 51 aaPredicted RBP2.58□□□□□ -2
BRCC3-209ENST00000620502 A0A0D9SG42 100 aa2.57□□□□□ -2
BRCC3-209ENST00000620502 A0A1B0GU69 56 aa2.57□□□□□ -2
BRCC3-209ENST00000620502 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
BRCC3-209ENST00000620502 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
BRCC3-209ENST00000620502 KRTAP12-1P59990 96 aa2.55□□□□□ -2
BRCC3-209ENST00000620502 TMEM258P61165 79 aa2.55□□□□□ -2
BRCC3-209ENST00000620502 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
BRCC3-209ENST00000620502 LINC01558Q9Y6Z2 57 aa2.53□□□□□ -2
BRCC3-209ENST00000620502 SPRR2EP22531 72 aa2.52□□□□□ -2.01
BRCC3-209ENST00000620502 SPRR2BP35325 72 aa2.52□□□□□ -2.01
BRCC3-209ENST00000620502 SPRR2AP35326 72 aa2.52□□□□□ -2.01
BRCC3-209ENST00000620502 SMIM26A0A096LP01 95 aa2.51□□□□□ -2.01
BRCC3-209ENST00000620502 RPS28P62857 69 aaKnown RBP2.51□□□□□ -2.01
BRCC3-209ENST00000620502 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
BRCC3-209ENST00000620502 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
BRCC3-209ENST00000620502 PRR15LQ9BU68 103 aa2.5□□□□□ -2.01
BRCC3-209ENST00000620502 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
BRCC3-209ENST00000620502 KRTAP2-4Q9BYR9 128 aa2.47□□□□□ -2.01
BRCC3-209ENST00000620502 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
BRCC3-209ENST00000620502 SPRR2DP22532 72 aa2.44□□□□□ -2.02
BRCC3-209ENST00000620502 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
BRCC3-209ENST00000620502 UQCR11O14957 56 aa2.43□□□□□ -2.02
BRCC3-209ENST00000620502 MT1EP04732 61 aa2.42□□□□□ -2.02
BRCC3-209ENST00000620502 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
BRCC3-209ENST00000620502 Q1T7F1 81 aa2.41□□□□□ -2.02
BRCC3-209ENST00000620502 KRTAP19-5Q3LI72 72 aa2.4□□□□□ -2.03
BRCC3-209ENST00000620502 MIR22HGQ0VDD5 57 aa2.39□□□□□ -2.03
BRCC3-209ENST00000620502 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
BRCC3-209ENST00000620502 V9GYY9 64 aa2.39□□□□□ -2.03
BRCC3-209ENST00000620502 PSPHP1O15172 72 aa2.38□□□□□ -2.03
BRCC3-209ENST00000620502 TNP1P09430 55 aa2.38□□□□□ -2.03
BRCC3-209ENST00000620502 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
BRCC3-209ENST00000620502 MT1GP13640 62 aa2.33□□□□□ -2.04
BRCC3-209ENST00000620502 MT1LQ93083 61 aa2.32□□□□□ -2.04
BRCC3-209ENST00000620502 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
BRCC3-209ENST00000620502 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
BRCC3-209ENST00000620502 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
BRCC3-209ENST00000620502 A6NED7 52 aa2.29□□□□□ -2.04
BRCC3-209ENST00000620502 K7ERS5 55 aa2.29□□□□□ -2.04
BRCC3-209ENST00000620502 KRTAP25-1Q3LHN0 102 aa2.29□□□□□ -2.04
BRCC3-209ENST00000620502 MT1MQ8N339 61 aa2.29□□□□□ -2.04
BRCC3-209ENST00000620502 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
BRCC3-209ENST00000620502 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
BRCC3-209ENST00000620502 PP632Q6XCG6 107 aa2.28□□□□□ -2.04
BRCC3-209ENST00000620502 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
BRCC3-209ENST00000620502 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
BRCC3-209ENST00000620502 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
BRCC3-209ENST00000620502 BRK1Q8WUW1 75 aa2.26□□□□□ -2.05
BRCC3-209ENST00000620502 CDC42SE1Q9NRR8 79 aa2.21□□□□□ -2.06
BRCC3-209ENST00000620502 ROMO1P60602 79 aa2.19□□□□□ -2.06
BRCC3-209ENST00000620502 PMAIP1Q13794 54 aa2.15□□□□□ -2.07
BRCC3-209ENST00000620502 MT4P47944 62 aa2.13□□□□□ -2.07
BRCC3-209ENST00000620502 KTN1-AS1Q86SY8 53 aa2.13□□□□□ -2.07
BRCC3-209ENST00000620502 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
BRCC3-209ENST00000620502 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
BRCC3-209ENST00000620502 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
BRCC3-209ENST00000620502 KRTAP12-4P60329 112 aa2□□□□□ -2.09
BRCC3-209ENST00000620502 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
BRCC3-209ENST00000620502 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
BRCC3-209ENST00000620502 MT1AP04731 61 aa1.97□□□□□ -2.09
BRCC3-209ENST00000620502 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
BRCC3-209ENST00000620502 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
BRCC3-209ENST00000620502 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
BRCC3-209ENST00000620502 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
BRCC3-209ENST00000620502 LUZP6Q538Z0 58 aa1.83□□□□□ -2.12
BRCC3-209ENST00000620502 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
BRCC3-209ENST00000620502 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
BRCC3-209ENST00000620502 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
BRCC3-209ENST00000620502 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
BRCC3-209ENST00000620502 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
BRCC3-209ENST00000620502 INE1O15225 51 aa1.42□□□□□ -2.18
BRCC3-209ENST00000620502 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
BRCC3-209ENST00000620502 PRM1P04553 51 aa1.12□□□□□ -2.23
BRCC3-209ENST00000620502 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
BRCC3-209ENST00000620502 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 90.2 ms