RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
SKP2-209ENST00000620197 MT1EP04732 61 aa4.5□□□□□ -1.69
SKP2-209ENST00000620197 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
SKP2-209ENST00000620197 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
SKP2-209ENST00000620197 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
SKP2-209ENST00000620197 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
SKP2-209ENST00000620197 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
SKP2-209ENST00000620197 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
SKP2-209ENST00000620197 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
SKP2-209ENST00000620197 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
SKP2-209ENST00000620197 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
SKP2-209ENST00000620197 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
SKP2-209ENST00000620197 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
SKP2-209ENST00000620197 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
SKP2-209ENST00000620197 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
SKP2-209ENST00000620197 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
SKP2-209ENST00000620197 MT1MQ8N339 61 aa4.18□□□□□ -1.74
SKP2-209ENST00000620197 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
SKP2-209ENST00000620197 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
SKP2-209ENST00000620197 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
SKP2-209ENST00000620197 MT1GP13640 62 aa4.13□□□□□ -1.75
SKP2-209ENST00000620197 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
SKP2-209ENST00000620197 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
SKP2-209ENST00000620197 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
SKP2-209ENST00000620197 MT1AP04731 61 aa3.92□□□□□ -1.78
SKP2-209ENST00000620197 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
SKP2-209ENST00000620197 MT3P25713 68 aa3.88□□□□□ -1.79
SKP2-209ENST00000620197 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
SKP2-209ENST00000620197 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
SKP2-209ENST00000620197 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
SKP2-209ENST00000620197 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
SKP2-209ENST00000620197 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
SKP2-209ENST00000620197 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
SKP2-209ENST00000620197 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
SKP2-209ENST00000620197 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
SKP2-209ENST00000620197 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
SKP2-209ENST00000620197 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
SKP2-209ENST00000620197 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.65□□□□□ -1.83
SKP2-209ENST00000620197 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
SKP2-209ENST00000620197 PRM1P04553 51 aa3.59□□□□□ -1.83
SKP2-209ENST00000620197 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
SKP2-209ENST00000620197 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
SKP2-209ENST00000620197 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
SKP2-209ENST00000620197 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
SKP2-209ENST00000620197 SPRR2EP22531 72 aa3.41□□□□□ -1.86
SKP2-209ENST00000620197 SPRR2BP35325 72 aa3.41□□□□□ -1.86
SKP2-209ENST00000620197 SPRR2AP35326 72 aa3.41□□□□□ -1.86
SKP2-209ENST00000620197 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
SKP2-209ENST00000620197 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
SKP2-209ENST00000620197 SPRR2DP22532 72 aa3.26□□□□□ -1.89
SKP2-209ENST00000620197 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
SKP2-209ENST00000620197 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.91
SKP2-209ENST00000620197 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
SKP2-209ENST00000620197 MT4P47944 62 aa3.02□□□□□ -1.93
SKP2-209ENST00000620197 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
SKP2-209ENST00000620197 NEBP20929 6669 aa3□□□□□ -1.93
SKP2-209ENST00000620197 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
SKP2-209ENST00000620197 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
SKP2-209ENST00000620197 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
SKP2-209ENST00000620197 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
SKP2-209ENST00000620197 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
SKP2-209ENST00000620197 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
SKP2-209ENST00000620197 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
SKP2-209ENST00000620197 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
SKP2-209ENST00000620197 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
SKP2-209ENST00000620197 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -2
SKP2-209ENST00000620197 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SKP2-209ENST00000620197 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
SKP2-209ENST00000620197 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
SKP2-209ENST00000620197 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
SKP2-209ENST00000620197 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
SKP2-209ENST00000620197 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
SKP2-209ENST00000620197 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
SKP2-209ENST00000620197 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
SKP2-209ENST00000620197 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
SKP2-209ENST00000620197 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
SKP2-209ENST00000620197 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 107 ms