RNA–Protein interactions for RNA: ENST00000619839.4

NCAM1-226, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-226ENST00000619839 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
NCAM1-226ENST00000619839 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
NCAM1-226ENST00000619839 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
NCAM1-226ENST00000619839 KRTAP9-6A0A140TA67 174 aa3.48□□□□□ -1.85
NCAM1-226ENST00000619839 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
NCAM1-226ENST00000619839 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
NCAM1-226ENST00000619839 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
NCAM1-226ENST00000619839 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
NCAM1-226ENST00000619839 MT1GP13640 62 aa3.43□□□□□ -1.86
NCAM1-226ENST00000619839 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
NCAM1-226ENST00000619839 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
NCAM1-226ENST00000619839 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
NCAM1-226ENST00000619839 MT1MQ8N339 61 aa3.33□□□□□ -1.88
NCAM1-226ENST00000619839 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
NCAM1-226ENST00000619839 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
NCAM1-226ENST00000619839 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
NCAM1-226ENST00000619839 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
NCAM1-226ENST00000619839 LCE3BQ5TA77 95 aa3.24□□□□□ -1.89
NCAM1-226ENST00000619839 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
NCAM1-226ENST00000619839 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
NCAM1-226ENST00000619839 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
NCAM1-226ENST00000619839 MT1AP04731 61 aa3.16□□□□□ -1.9
NCAM1-226ENST00000619839 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
NCAM1-226ENST00000619839 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
NCAM1-226ENST00000619839 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
NCAM1-226ENST00000619839 MACF1Q9UPN3 7388 aaKnown RBP3.12□□□□□ -1.91
NCAM1-226ENST00000619839 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
NCAM1-226ENST00000619839 PRM1P04553 51 aa3.12□□□□□ -1.91
NCAM1-226ENST00000619839 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
NCAM1-226ENST00000619839 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
NCAM1-226ENST00000619839 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
NCAM1-226ENST00000619839 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
NCAM1-226ENST00000619839 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
NCAM1-226ENST00000619839 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
NCAM1-226ENST00000619839 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
NCAM1-226ENST00000619839 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
NCAM1-226ENST00000619839 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
NCAM1-226ENST00000619839 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
NCAM1-226ENST00000619839 NEBP20929 6669 aa2.87□□□□□ -1.95
NCAM1-226ENST00000619839 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
NCAM1-226ENST00000619839 SPRR2EP22531 72 aa2.81□□□□□ -1.96
NCAM1-226ENST00000619839 SPRR2BP35325 72 aa2.81□□□□□ -1.96
NCAM1-226ENST00000619839 SPRR2AP35326 72 aa2.81□□□□□ -1.96
NCAM1-226ENST00000619839 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
NCAM1-226ENST00000619839 SPRR2DP22532 72 aa2.74□□□□□ -1.97
NCAM1-226ENST00000619839 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
NCAM1-226ENST00000619839 MT3P25713 68 aa2.7□□□□□ -1.98
NCAM1-226ENST00000619839 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
NCAM1-226ENST00000619839 LCE4AQ5TA78 99 aa2.59□□□□□ -2
NCAM1-226ENST00000619839 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
NCAM1-226ENST00000619839 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
NCAM1-226ENST00000619839 MT4P47944 62 aa2.33□□□□□ -2.04
NCAM1-226ENST00000619839 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
NCAM1-226ENST00000619839 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
NCAM1-226ENST00000619839 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
NCAM1-226ENST00000619839 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
NCAM1-226ENST00000619839 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
NCAM1-226ENST00000619839 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
NCAM1-226ENST00000619839 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
NCAM1-226ENST00000619839 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
NCAM1-226ENST00000619839 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
NCAM1-226ENST00000619839 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
NCAM1-226ENST00000619839 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
NCAM1-226ENST00000619839 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
NCAM1-226ENST00000619839 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
NCAM1-226ENST00000619839 KRTAP4-2Q9BYR5 136 aa2.04□□□□□ -2.08
NCAM1-226ENST00000619839 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
NCAM1-226ENST00000619839 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
NCAM1-226ENST00000619839 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
NCAM1-226ENST00000619839 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
NCAM1-226ENST00000619839 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
NCAM1-226ENST00000619839 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
NCAM1-226ENST00000619839 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
NCAM1-226ENST00000619839 KRTAP4-12Q9BQ66 201 aa1.79□□□□□ -2.12
NCAM1-226ENST00000619839 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
NCAM1-226ENST00000619839 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
NCAM1-226ENST00000619839 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 54.2 ms