RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	KRTAP4-3	Q9BYR4	195 aa		4.83	□□□□□ -1.64
SMTN-223	ENST00000619644	DST	Q03001	7570 aa	Known RBP	4.83	□□□□□ -1.64
SMTN-223	ENST00000619644	LOC100996750	A0A140TA64	210 aa		4.82	□□□□□ -1.64
SMTN-223	ENST00000619644	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.81	□□□□□ -1.64
SMTN-223	ENST00000619644	MT1G	P13640	62 aa		4.77	□□□□□ -1.65
SMTN-223	ENST00000619644	KRTAP19-4	Q3LI73	84 aa		4.73	□□□□□ -1.65
SMTN-223	ENST00000619644	KRTAP19-6	Q3LI70	58 aa		4.68	□□□□□ -1.66
SMTN-223	ENST00000619644	LCE2D	Q5TA82	110 aa	Predicted RBP	4.65	□□□□□ -1.67
SMTN-223	ENST00000619644	MT1M	Q8N339	61 aa		4.61	□□□□□ -1.67
SMTN-223	ENST00000619644	KRTAP19-3	Q7Z4W3	81 aa		4.59	□□□□□ -1.67
SMTN-223	ENST00000619644	SYNE1	Q8NF91	8797 aa	Known RBP	4.58	□□□□□ -1.68
SMTN-223	ENST00000619644	KRTAP12-4	P60329	112 aa		4.57	□□□□□ -1.68
SMTN-223	ENST00000619644	SPRR2F	Q96RM1	72 aa		4.55	□□□□□ -1.68
SMTN-223	ENST00000619644	KRTAP9-2	Q9BYQ4	174 aa		4.55	□□□□□ -1.68
SMTN-223	ENST00000619644	LCE3B	Q5TA77	95 aa		4.48	□□□□□ -1.69
SMTN-223	ENST00000619644	SYNE2	Q8WXH0	6885 aa	Known RBP	4.47	□□□□□ -1.69
SMTN-223	ENST00000619644	MACF1	Q9UPN3	7388 aa	Known RBP	4.45	□□□□□ -1.7
SMTN-223	ENST00000619644	KRTAP4-9	Q9BYQ8	210 aa		4.41	□□□□□ -1.7
SMTN-223	ENST00000619644	LCE5A	Q5TCM9	118 aa		4.37	□□□□□ -1.71
SMTN-223	ENST00000619644	OBSCN	Q5VST9	7968 aa		4.36	□□□□□ -1.71
SMTN-223	ENST00000619644	MDN1	Q9NU22	5596 aa		4.33	□□□□□ -1.72
SMTN-223	ENST00000619644	KRTAP6-1	Q3LI64	71 aa		4.25	□□□□□ -1.73
SMTN-223	ENST00000619644	KRTAP9-6	A0A140TA67	174 aa		4.17	□□□□□ -1.74
SMTN-223	ENST00000619644	MT1A	P04731	61 aa		4.16	□□□□□ -1.74
SMTN-223	ENST00000619644	LCE3D	Q9BYE3	92 aa		4.15	□□□□□ -1.74
SMTN-223	ENST00000619644	KRTAP9-7	A8MTY7	169 aa		4.13	□□□□□ -1.75
SMTN-223	ENST00000619644	PRM1	P04553	51 aa		4.11	□□□□□ -1.75
SMTN-223	ENST00000619644	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.09	□□□□□ -1.75
SMTN-223	ENST00000619644	SPRR2E	P22531	72 aa		4.08	□□□□□ -1.76
SMTN-223	ENST00000619644	SPRR2B	P35325	72 aa		4.08	□□□□□ -1.76
SMTN-223	ENST00000619644	SPRR2A	P35326	72 aa		4.08	□□□□□ -1.76
SMTN-223	ENST00000619644	LCE3E	Q5T5B0	92 aa		4.08	□□□□□ -1.76
SMTN-223	ENST00000619644	LCE1A	Q5T7P2	110 aa		4.07	□□□□□ -1.76
SMTN-223	ENST00000619644	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.01	□□□□□ -1.77
SMTN-223	ENST00000619644	KRTAP2-2	Q9BYT5	123 aa		3.93	□□□□□ -1.78
SMTN-223	ENST00000619644	KRTAP6-3	Q3LI67	103 aa		3.92	□□□□□ -1.78
SMTN-223	ENST00000619644	KRTAP5-9	P26371	169 aa		3.89	□□□□□ -1.79
SMTN-223	ENST00000619644	SPRR2D	P22532	72 aa		3.89	□□□□□ -1.79
SMTN-223	ENST00000619644	KRTAP6-2	Q3LI66	62 aa		3.87	□□□□□ -1.79
SMTN-223	ENST00000619644	KRTAP9-4	Q9BYQ2	154 aa		3.86	□□□□□ -1.79
SMTN-223	ENST00000619644	LCE1E	Q5T753	118 aa		3.75	□□□□□ -1.81
SMTN-223	ENST00000619644	MT3	P25713	68 aa		3.74	□□□□□ -1.81
SMTN-223	ENST00000619644	NEB	P20929	6669 aa		3.7	□□□□□ -1.82
SMTN-223	ENST00000619644	LCE1F	Q5T754	118 aa		3.66	□□□□□ -1.82
SMTN-223	ENST00000619644	LCE1D	Q5T752	114 aa		3.59	□□□□□ -1.84
SMTN-223	ENST00000619644	MUC19	Q7Z5P9	8384 aa		3.58	□□□□□ -1.84
SMTN-223	ENST00000619644	MT4	P47944	62 aa		3.55	□□□□□ -1.84
SMTN-223	ENST00000619644	KRTAP4-6	Q9BYQ5	205 aa		3.49	□□□□□ -1.85
SMTN-223	ENST00000619644	KRTAP5-4	Q6L8H1	288 aa		3.36	□□□□□ -1.87
SMTN-223	ENST00000619644	KRTAP20-1	Q3LI63	56 aa		3.36	□□□□□ -1.87
SMTN-223	ENST00000619644	KRTAP20-2	Q3LI61	65 aa		3.3	□□□□□ -1.88
SMTN-223	ENST00000619644	HMCN1	Q96RW7	5635 aa		3.28	□□□□□ -1.88
SMTN-223	ENST00000619644	KRTAP9-9	Q9BYP9	154 aa		3.24	□□□□□ -1.89
SMTN-223	ENST00000619644	MUC5AC	P98088	5654 aa		3.21	□□□□□ -1.89
SMTN-223	ENST00000619644	LCE1B	Q5T7P3	118 aa		3.21	□□□□□ -1.9
SMTN-223	ENST00000619644	LCE4A	Q5TA78	99 aa		3.19	□□□□□ -1.9
SMTN-223	ENST00000619644	KRTAP5-2	Q701N4	177 aa		3.15	□□□□□ -1.91
SMTN-223	ENST00000619644	KRTAP4-11	Q9BYQ6	195 aa		3.08	□□□□□ -1.92
SMTN-223	ENST00000619644	KRTAP5-3	Q6L8H2	238 aa		3.04	□□□□□ -1.92
SMTN-223	ENST00000619644	KRTAP5-10	Q6L8G5	202 aa		2.97	□□□□□ -1.93
SMTN-223	ENST00000619644	KRTAP5-1	Q6L8H4	278 aa		2.85	□□□□□ -1.95
SMTN-223	ENST00000619644	KRTAP4-2	Q9BYR5	136 aa		2.81	□□□□□ -1.96
SMTN-223	ENST00000619644	AHNAK2	Q8IVF2	5795 aa		2.8	□□□□□ -1.96
SMTN-223	ENST00000619644	LCE1C	Q5T751	118 aa		2.76	□□□□□ -1.97
SMTN-223	ENST00000619644	GPR98	Q8WXG9	6306 aa		2.7	□□□□□ -1.98
SMTN-223	ENST00000619644	KRTAP4-4	Q9BYR3	166 aa		2.68	□□□□□ -1.98
SMTN-223	ENST00000619644	KRTAP21-2	Q3LI59	83 aa		2.66	□□□□□ -1.98
SMTN-223	ENST00000619644	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.61	□□□□□ -1.99
SMTN-223	ENST00000619644	KRTAP21-1	Q3LI58	79 aa		2.59	□□□□□ -2
SMTN-223	ENST00000619644	KRTAP5-8	O75690	187 aa		2.53	□□□□□ -2
SMTN-223	ENST00000619644	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.51	□□□□□ -2.01
SMTN-223	ENST00000619644	KRTAP4-12	Q9BQ66	201 aa		2.5	□□□□□ -2.01
SMTN-223	ENST00000619644	KRTAP5-7	Q6L8G8	165 aa		2.35	□□□□□ -2.03
SMTN-223	ENST00000619644	KRTAP5-11	Q6L8G4	156 aa		2.34	□□□□□ -2.03
SMTN-223	ENST00000619644	AHNAK	Q09666	5890 aa	Known RBP	2.12	□□□□□ -2.07
SMTN-223	ENST00000619644	PHGR1	C9JFL3	82 aa		2.05	□□□□□ -2.08
SMTN-223	ENST00000619644	MUC16	Q8WXI7	14507 aa		1.41	□□□□□ -2.18

Retrieved 77 of 20,778 RNA–protein pairs in 55.5 ms