RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 KRTAP19-3Q7Z4W3 81 aa6.5□□□□□ -1.37
PSPC1-206ENST00000619300 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
PSPC1-206ENST00000619300 KRTAP9-6A8MVA2 160 aa6.49□□□□□ -1.37
PSPC1-206ENST00000619300 MACF1Q9UPN3 7388 aaKnown RBP6.48□□□□□ -1.37
PSPC1-206ENST00000619300 MUC12Q9UKN1 5478 aa6.47□□□□□ -1.37
PSPC1-206ENST00000619300 MT1GP13640 62 aa6.47□□□□□ -1.37
PSPC1-206ENST00000619300 MT1MQ8N339 61 aa6.4□□□□□ -1.38
PSPC1-206ENST00000619300 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
PSPC1-206ENST00000619300 KRTAP4-3Q9BYR4 195 aa6.33□□□□□ -1.4
PSPC1-206ENST00000619300 KRTAP5-9P26371 169 aa6.3□□□□□ -1.4
PSPC1-206ENST00000619300 SYNE2Q8WXH0 6885 aaKnown RBP6.29□□□□□ -1.4
PSPC1-206ENST00000619300 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
PSPC1-206ENST00000619300 LCE1AQ5T7P2 110 aa6.17□□□□□ -1.42
PSPC1-206ENST00000619300 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
PSPC1-206ENST00000619300 MDN1Q9NU22 5596 aa6.12□□□□□ -1.43
PSPC1-206ENST00000619300 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
PSPC1-206ENST00000619300 KRTAP2-3P0C7H8 128 aa6.11□□□□□ -1.43
PSPC1-206ENST00000619300 KRTAP2-4Q9BYR9 128 aa6.11□□□□□ -1.43
PSPC1-206ENST00000619300 KRTAP2-1Q9BYU5 128 aa6.11□□□□□ -1.43
PSPC1-206ENST00000619300 SPRR2EP22531 72 aa6.07□□□□□ -1.44
PSPC1-206ENST00000619300 SPRR2BP35325 72 aa6.07□□□□□ -1.44
PSPC1-206ENST00000619300 SPRR2AP35326 72 aa6.07□□□□□ -1.44
PSPC1-206ENST00000619300 KRTAP6-3Q3LI67 103 aa6.06□□□□□ -1.44
PSPC1-206ENST00000619300 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
PSPC1-206ENST00000619300 SPRR2DP22532 72 aa5.84□□□□□ -1.48
PSPC1-206ENST00000619300 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
PSPC1-206ENST00000619300 MT1AP04731 61 aa5.7□□□□□ -1.5
PSPC1-206ENST00000619300 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
PSPC1-206ENST00000619300 KRTAP9-7A8MTY7 169 aa5.67□□□□□ -1.5
PSPC1-206ENST00000619300 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
PSPC1-206ENST00000619300 NEBP20929 6669 aa5.57□□□□□ -1.52
PSPC1-206ENST00000619300 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
PSPC1-206ENST00000619300 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
PSPC1-206ENST00000619300 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
PSPC1-206ENST00000619300 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
PSPC1-206ENST00000619300 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
PSPC1-206ENST00000619300 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
PSPC1-206ENST00000619300 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
PSPC1-206ENST00000619300 MT3P25713 68 aa5.16□□□□□ -1.58
PSPC1-206ENST00000619300 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
PSPC1-206ENST00000619300 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.58
PSPC1-206ENST00000619300 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
PSPC1-206ENST00000619300 MT4P47944 62 aa5.09□□□□□ -1.6
PSPC1-206ENST00000619300 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
PSPC1-206ENST00000619300 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
PSPC1-206ENST00000619300 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
PSPC1-206ENST00000619300 LCE1DQ5T752 114 aa4.94□□□□□ -1.62
PSPC1-206ENST00000619300 HMCN1Q96RW7 5635 aa4.89□□□□□ -1.63
PSPC1-206ENST00000619300 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
PSPC1-206ENST00000619300 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
PSPC1-206ENST00000619300 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
PSPC1-206ENST00000619300 PRM1P04553 51 aa4.61□□□□□ -1.67
PSPC1-206ENST00000619300 LCE1EQ5T753 118 aa4.4□□□□□ -1.7
PSPC1-206ENST00000619300 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
PSPC1-206ENST00000619300 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
PSPC1-206ENST00000619300 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
PSPC1-206ENST00000619300 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
PSPC1-206ENST00000619300 AHNAK2Q8IVF2 5795 aa4.15□□□□□ -1.74
PSPC1-206ENST00000619300 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
PSPC1-206ENST00000619300 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
PSPC1-206ENST00000619300 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
PSPC1-206ENST00000619300 KRTAP5-8O75690 187 aa4.09□□□□□ -1.76
PSPC1-206ENST00000619300 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
PSPC1-206ENST00000619300 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
PSPC1-206ENST00000619300 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
PSPC1-206ENST00000619300 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
PSPC1-206ENST00000619300 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
PSPC1-206ENST00000619300 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
PSPC1-206ENST00000619300 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
PSPC1-206ENST00000619300 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
PSPC1-206ENST00000619300 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
PSPC1-206ENST00000619300 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
PSPC1-206ENST00000619300 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
PSPC1-206ENST00000619300 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
PSPC1-206ENST00000619300 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
PSPC1-206ENST00000619300 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
PSPC1-206ENST00000619300 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 57.8 ms