RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 KRTAP4-7Q9BYR0 210 aa8.76□□□□□ -1.01
VEGFC-202ENST00000618562 SPRR2FQ96RM1 72 aa8.75□□□□□ -1.01
VEGFC-202ENST00000618562 KRTAP9-6A8MVA2 160 aa8.74□□□□□ -1.01
VEGFC-202ENST00000618562 INE1O15225 51 aa8.73□□□□□ -1.01
VEGFC-202ENST00000618562 SYNE2Q8WXH0 6885 aaKnown RBP8.69□□□□□ -1.02
VEGFC-202ENST00000618562 KRTAP19-3Q7Z4W3 81 aa8.67□□□□□ -1.02
VEGFC-202ENST00000618562 MT1GP13640 62 aa8.58□□□□□ -1.04
VEGFC-202ENST00000618562 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
VEGFC-202ENST00000618562 KRTAP5-9P26371 169 aa8.57□□□□□ -1.04
VEGFC-202ENST00000618562 MT1MQ8N339 61 aa8.53□□□□□ -1.04
VEGFC-202ENST00000618562 LCE5AQ5TCM9 118 aa8.5□□□□□ -1.05
VEGFC-202ENST00000618562 KRTAP4-3Q9BYR4 195 aa8.45□□□□□ -1.06
VEGFC-202ENST00000618562 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.45□□□□□ -1.06
VEGFC-202ENST00000618562 KRTAP2-3P0C7H8 128 aa8.44□□□□□ -1.06
VEGFC-202ENST00000618562 KRTAP2-4Q9BYR9 128 aa8.44□□□□□ -1.06
VEGFC-202ENST00000618562 KRTAP2-1Q9BYU5 128 aa8.44□□□□□ -1.06
VEGFC-202ENST00000618562 LCE1AQ5T7P2 110 aa8.35□□□□□ -1.07
VEGFC-202ENST00000618562 MDN1Q9NU22 5596 aa8.34□□□□□ -1.07
VEGFC-202ENST00000618562 KRTAP6-3Q3LI67 103 aa8.29□□□□□ -1.08
VEGFC-202ENST00000618562 SPRR2EP22531 72 aa8.23□□□□□ -1.09
VEGFC-202ENST00000618562 SPRR2BP35325 72 aa8.23□□□□□ -1.09
VEGFC-202ENST00000618562 SPRR2AP35326 72 aa8.23□□□□□ -1.09
VEGFC-202ENST00000618562 LOC100996750A0A140TA64 210 aa8.21□□□□□ -1.1
VEGFC-202ENST00000618562 DSTQ03001 7570 aaKnown RBP8.16□□□□□ -1.1
VEGFC-202ENST00000618562 SPRR2DP22532 72 aa7.91□□□□□ -1.14
VEGFC-202ENST00000618562 KRTAP9-7A8MTY7 169 aa7.9□□□□□ -1.15
VEGFC-202ENST00000618562 NEBP20929 6669 aa7.73□□□□□ -1.17
VEGFC-202ENST00000618562 KRTAP5-5Q701N2 237 aaPredicted RBP7.68□□□□□ -1.18
VEGFC-202ENST00000618562 LCE3BQ5TA77 95 aa7.59□□□□□ -1.19
VEGFC-202ENST00000618562 MT1AP04731 61 aa7.56□□□□□ -1.2
VEGFC-202ENST00000618562 KRTAP6-1Q3LI64 71 aa7.55□□□□□ -1.2
VEGFC-202ENST00000618562 KRTAP12-4P60329 112 aa7.34□□□□□ -1.23
VEGFC-202ENST00000618562 SYNE1Q8NF91 8797 aaKnown RBP7.3□□□□□ -1.24
VEGFC-202ENST00000618562 KRTAP5-4Q6L8H1 288 aa7.21□□□□□ -1.25
VEGFC-202ENST00000618562 KRTAP9-4Q9BYQ2 154 aa7.17□□□□□ -1.26
VEGFC-202ENST00000618562 KRTAP4-9Q9BYQ8 210 aa7.15□□□□□ -1.26
VEGFC-202ENST00000618562 KRTAP2-2Q9BYT5 123 aa7.05□□□□□ -1.28
VEGFC-202ENST00000618562 LCE3DQ9BYE3 92 aa7.02□□□□□ -1.29
VEGFC-202ENST00000618562 KRTAP20-1Q3LI63 56 aa7□□□□□ -1.29
VEGFC-202ENST00000618562 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
VEGFC-202ENST00000618562 LCE3EQ5T5B0 92 aa6.91□□□□□ -1.3
VEGFC-202ENST00000618562 MT4P47944 62 aa6.91□□□□□ -1.3
VEGFC-202ENST00000618562 KRTAP6-2Q3LI66 62 aa6.91□□□□□ -1.3
VEGFC-202ENST00000618562 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.3
VEGFC-202ENST00000618562 MT3P25713 68 aa6.81□□□□□ -1.32
VEGFC-202ENST00000618562 KRTAP20-2Q3LI61 65 aa6.75□□□□□ -1.33
VEGFC-202ENST00000618562 LCE1DQ5T752 114 aa6.74□□□□□ -1.33
VEGFC-202ENST00000618562 HMCN1Q96RW7 5635 aa6.69□□□□□ -1.34
VEGFC-202ENST00000618562 KRTAP5-2Q701N4 177 aa6.59□□□□□ -1.35
VEGFC-202ENST00000618562 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
VEGFC-202ENST00000618562 PRM1P04553 51 aa6.46□□□□□ -1.38
VEGFC-202ENST00000618562 OBSCNQ5VST9 7968 aa6.43□□□□□ -1.38
VEGFC-202ENST00000618562 LCE1EQ5T753 118 aa5.86□□□□□ -1.47
VEGFC-202ENST00000618562 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
VEGFC-202ENST00000618562 AHNAK2Q8IVF2 5795 aa5.78□□□□□ -1.48
VEGFC-202ENST00000618562 KRTAP5-1Q6L8H4 278 aa5.68□□□□□ -1.5
VEGFC-202ENST00000618562 KRTAP5-8O75690 187 aa5.59□□□□□ -1.52
VEGFC-202ENST00000618562 MUC5ACP98088 5654 aa5.58□□□□□ -1.52
VEGFC-202ENST00000618562 KRTAP5-10Q6L8G5 202 aa5.57□□□□□ -1.52
VEGFC-202ENST00000618562 LCE1BQ5T7P3 118 aa5.56□□□□□ -1.52
VEGFC-202ENST00000618562 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
VEGFC-202ENST00000618562 LCE1CQ5T751 118 aa5.48□□□□□ -1.53
VEGFC-202ENST00000618562 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
VEGFC-202ENST00000618562 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.14□□□□□ -1.59
VEGFC-202ENST00000618562 GPR98Q8WXG9 6306 aa5.06□□□□□ -1.6
VEGFC-202ENST00000618562 KRTAP21-2Q3LI59 83 aa4.93□□□□□ -1.62
VEGFC-202ENST00000618562 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
VEGFC-202ENST00000618562 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
VEGFC-202ENST00000618562 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
VEGFC-202ENST00000618562 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
VEGFC-202ENST00000618562 KRTAP4-4Q9BYR3 166 aa4.42□□□□□ -1.7
VEGFC-202ENST00000618562 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
VEGFC-202ENST00000618562 AHNAKQ09666 5890 aaKnown RBP4.22□□□□□ -1.73
VEGFC-202ENST00000618562 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
VEGFC-202ENST00000618562 KRTAP21-1Q3LI58 79 aa4.09□□□□□ -1.75
VEGFC-202ENST00000618562 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
VEGFC-202ENST00000618562 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms