RNA–Protein interactions for RNA: ENST00000618539.4

FDFT1-224, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FDFT1, Length 2,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-224ENST00000618539 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
FDFT1-224ENST00000618539 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
FDFT1-224ENST00000618539 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
FDFT1-224ENST00000618539 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
FDFT1-224ENST00000618539 KRTAP6-3Q3LI67 103 aa5.44□□□□□ -1.54
FDFT1-224ENST00000618539 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
FDFT1-224ENST00000618539 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
FDFT1-224ENST00000618539 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
FDFT1-224ENST00000618539 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
FDFT1-224ENST00000618539 SPRR2FQ96RM1 72 aa5.32□□□□□ -1.56
FDFT1-224ENST00000618539 MT1EP04732 61 aa5.3□□□□□ -1.56
FDFT1-224ENST00000618539 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
FDFT1-224ENST00000618539 MT1LQ93083 61 aa5.19□□□□□ -1.58
FDFT1-224ENST00000618539 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
FDFT1-224ENST00000618539 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
FDFT1-224ENST00000618539 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
FDFT1-224ENST00000618539 SPRR2EP22531 72 aa5.13□□□□□ -1.59
FDFT1-224ENST00000618539 SPRR2BP35325 72 aa5.13□□□□□ -1.59
FDFT1-224ENST00000618539 SPRR2AP35326 72 aa5.13□□□□□ -1.59
FDFT1-224ENST00000618539 KRTAP2-2Q9BYT5 123 aa5.12□□□□□ -1.59
FDFT1-224ENST00000618539 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
FDFT1-224ENST00000618539 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
FDFT1-224ENST00000618539 MT1GP13640 62 aa5.09□□□□□ -1.6
FDFT1-224ENST00000618539 NEBP20929 6669 aa5.06□□□□□ -1.6
FDFT1-224ENST00000618539 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
FDFT1-224ENST00000618539 MT1MQ8N339 61 aa5□□□□□ -1.61
FDFT1-224ENST00000618539 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
FDFT1-224ENST00000618539 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
FDFT1-224ENST00000618539 SPRR2DP22532 72 aa4.95□□□□□ -1.62
FDFT1-224ENST00000618539 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
FDFT1-224ENST00000618539 KRTAP20-1Q3LI63 56 aa4.75□□□□□ -1.65
FDFT1-224ENST00000618539 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
FDFT1-224ENST00000618539 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.65
FDFT1-224ENST00000618539 PRM1P04553 51 aa4.67□□□□□ -1.66
FDFT1-224ENST00000618539 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
FDFT1-224ENST00000618539 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
FDFT1-224ENST00000618539 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
FDFT1-224ENST00000618539 MT1AP04731 61 aa4.51□□□□□ -1.69
FDFT1-224ENST00000618539 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
FDFT1-224ENST00000618539 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
FDFT1-224ENST00000618539 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
FDFT1-224ENST00000618539 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
FDFT1-224ENST00000618539 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
FDFT1-224ENST00000618539 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
FDFT1-224ENST00000618539 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
FDFT1-224ENST00000618539 MT4P47944 62 aa4.26□□□□□ -1.73
FDFT1-224ENST00000618539 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
FDFT1-224ENST00000618539 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
FDFT1-224ENST00000618539 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
FDFT1-224ENST00000618539 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
FDFT1-224ENST00000618539 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
FDFT1-224ENST00000618539 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
FDFT1-224ENST00000618539 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
FDFT1-224ENST00000618539 MT3P25713 68 aa3.98□□□□□ -1.77
FDFT1-224ENST00000618539 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
FDFT1-224ENST00000618539 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
FDFT1-224ENST00000618539 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
FDFT1-224ENST00000618539 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
FDFT1-224ENST00000618539 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
FDFT1-224ENST00000618539 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
FDFT1-224ENST00000618539 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
FDFT1-224ENST00000618539 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
FDFT1-224ENST00000618539 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
FDFT1-224ENST00000618539 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
FDFT1-224ENST00000618539 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
FDFT1-224ENST00000618539 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
FDFT1-224ENST00000618539 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
FDFT1-224ENST00000618539 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
FDFT1-224ENST00000618539 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
FDFT1-224ENST00000618539 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
FDFT1-224ENST00000618539 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
FDFT1-224ENST00000618539 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
FDFT1-224ENST00000618539 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
FDFT1-224ENST00000618539 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
FDFT1-224ENST00000618539 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
FDFT1-224ENST00000618539 PHGR1C9JFL3 82 aa2.53□□□□□ -2.01
FDFT1-224ENST00000618539 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 150 ms