RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
MATR3-227ENST00000618441 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
MATR3-227ENST00000618441 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
MATR3-227ENST00000618441 MUC19Q7Z5P9 8384 aa4.21□□□□□ -1.74
MATR3-227ENST00000618441 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
MATR3-227ENST00000618441 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
MATR3-227ENST00000618441 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
MATR3-227ENST00000618441 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
MATR3-227ENST00000618441 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
MATR3-227ENST00000618441 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
MATR3-227ENST00000618441 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
MATR3-227ENST00000618441 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
MATR3-227ENST00000618441 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
MATR3-227ENST00000618441 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
MATR3-227ENST00000618441 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
MATR3-227ENST00000618441 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
MATR3-227ENST00000618441 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
MATR3-227ENST00000618441 MT1GP13640 62 aa3.95□□□□□ -1.78
MATR3-227ENST00000618441 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
MATR3-227ENST00000618441 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
MATR3-227ENST00000618441 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
MATR3-227ENST00000618441 LCE3BQ5TA77 95 aa3.91□□□□□ -1.78
MATR3-227ENST00000618441 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.79
MATR3-227ENST00000618441 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
MATR3-227ENST00000618441 PRM1P04553 51 aa3.87□□□□□ -1.79
MATR3-227ENST00000618441 KRTAP19-7Q3SYF9 63 aa3.87□□□□□ -1.79
MATR3-227ENST00000618441 MT1LQ93083 61 aa3.85□□□□□ -1.79
MATR3-227ENST00000618441 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.8
MATR3-227ENST00000618441 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
MATR3-227ENST00000618441 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
MATR3-227ENST00000618441 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
MATR3-227ENST00000618441 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
MATR3-227ENST00000618441 MT1EP04732 61 aa3.74□□□□□ -1.81
MATR3-227ENST00000618441 SPRR2EP22531 72 aa3.72□□□□□ -1.81
MATR3-227ENST00000618441 SPRR2BP35325 72 aa3.72□□□□□ -1.81
MATR3-227ENST00000618441 SPRR2AP35326 72 aa3.72□□□□□ -1.81
MATR3-227ENST00000618441 MT3P25713 68 aa3.68□□□□□ -1.82
MATR3-227ENST00000618441 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
MATR3-227ENST00000618441 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
MATR3-227ENST00000618441 SPRR2DP22532 72 aa3.55□□□□□ -1.84
MATR3-227ENST00000618441 MT1MQ8N339 61 aa3.54□□□□□ -1.84
MATR3-227ENST00000618441 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
MATR3-227ENST00000618441 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
MATR3-227ENST00000618441 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
MATR3-227ENST00000618441 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
MATR3-227ENST00000618441 MT4P47944 62 aa3.34□□□□□ -1.87
MATR3-227ENST00000618441 MT1AP04731 61 aa3.32□□□□□ -1.88
MATR3-227ENST00000618441 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
MATR3-227ENST00000618441 NEBP20929 6669 aa3.12□□□□□ -1.91
MATR3-227ENST00000618441 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
MATR3-227ENST00000618441 KRTAP4-6Q9BYQ5 205 aa2.99□□□□□ -1.93
MATR3-227ENST00000618441 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
MATR3-227ENST00000618441 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
MATR3-227ENST00000618441 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
MATR3-227ENST00000618441 LCE1CQ5T751 118 aa2.84□□□□□ -1.96
MATR3-227ENST00000618441 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
MATR3-227ENST00000618441 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
MATR3-227ENST00000618441 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
MATR3-227ENST00000618441 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
MATR3-227ENST00000618441 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
MATR3-227ENST00000618441 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
MATR3-227ENST00000618441 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.02
MATR3-227ENST00000618441 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
MATR3-227ENST00000618441 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
MATR3-227ENST00000618441 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
MATR3-227ENST00000618441 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
MATR3-227ENST00000618441 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
MATR3-227ENST00000618441 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
MATR3-227ENST00000618441 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
MATR3-227ENST00000618441 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
MATR3-227ENST00000618441 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
MATR3-227ENST00000618441 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
MATR3-227ENST00000618441 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
MATR3-227ENST00000618441 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
MATR3-227ENST00000618441 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
MATR3-227ENST00000618441 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
MATR3-227ENST00000618441 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 110.6 ms