RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
SRRT-217ENST00000618411 CRCT1Q9UGL9 99 aa4.8□□□□□ -1.64
SRRT-217ENST00000618411 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
SRRT-217ENST00000618411 MT1GP13640 62 aa4.73□□□□□ -1.65
SRRT-217ENST00000618411 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
SRRT-217ENST00000618411 MT1MQ8N339 61 aa4.62□□□□□ -1.67
SRRT-217ENST00000618411 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
SRRT-217ENST00000618411 SSPOA2VEC9 5147 aa4.53□□□□□ -1.68
SRRT-217ENST00000618411 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
SRRT-217ENST00000618411 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
SRRT-217ENST00000618411 MT1AP04731 61 aa4.51□□□□□ -1.69
SRRT-217ENST00000618411 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
SRRT-217ENST00000618411 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
SRRT-217ENST00000618411 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
SRRT-217ENST00000618411 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
SRRT-217ENST00000618411 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
SRRT-217ENST00000618411 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
SRRT-217ENST00000618411 PRM1P04553 51 aa4.36□□□□□ -1.71
SRRT-217ENST00000618411 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
SRRT-217ENST00000618411 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
SRRT-217ENST00000618411 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
SRRT-217ENST00000618411 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
SRRT-217ENST00000618411 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
SRRT-217ENST00000618411 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
SRRT-217ENST00000618411 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
SRRT-217ENST00000618411 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
SRRT-217ENST00000618411 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
SRRT-217ENST00000618411 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
SRRT-217ENST00000618411 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
SRRT-217ENST00000618411 NEBP20929 6669 aa4.02□□□□□ -1.77
SRRT-217ENST00000618411 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
SRRT-217ENST00000618411 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
SRRT-217ENST00000618411 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
SRRT-217ENST00000618411 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
SRRT-217ENST00000618411 KRTAP5-9P26371 169 aa3.9□□□□□ -1.79
SRRT-217ENST00000618411 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
SRRT-217ENST00000618411 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
SRRT-217ENST00000618411 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
SRRT-217ENST00000618411 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
SRRT-217ENST00000618411 MT3P25713 68 aa3.79□□□□□ -1.8
SRRT-217ENST00000618411 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
SRRT-217ENST00000618411 SPRR2AP35326 72 aa3.78□□□□□ -1.8
SRRT-217ENST00000618411 SPRR2EP22531 72 aa3.71□□□□□ -1.82
SRRT-217ENST00000618411 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
SRRT-217ENST00000618411 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
SRRT-217ENST00000618411 SPRR2BP35325 72 aa3.63□□□□□ -1.83
SRRT-217ENST00000618411 SPRR2DP22532 72 aa3.48□□□□□ -1.85
SRRT-217ENST00000618411 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
SRRT-217ENST00000618411 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
SRRT-217ENST00000618411 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
SRRT-217ENST00000618411 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
SRRT-217ENST00000618411 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
SRRT-217ENST00000618411 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
SRRT-217ENST00000618411 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
SRRT-217ENST00000618411 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.9
SRRT-217ENST00000618411 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.9
SRRT-217ENST00000618411 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
SRRT-217ENST00000618411 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
SRRT-217ENST00000618411 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
SRRT-217ENST00000618411 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
SRRT-217ENST00000618411 MT4P47944 62 aa3.05□□□□□ -1.92
SRRT-217ENST00000618411 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
SRRT-217ENST00000618411 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
SRRT-217ENST00000618411 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
SRRT-217ENST00000618411 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
SRRT-217ENST00000618411 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
SRRT-217ENST00000618411 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SRRT-217ENST00000618411 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
SRRT-217ENST00000618411 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
SRRT-217ENST00000618411 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
SRRT-217ENST00000618411 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.97
SRRT-217ENST00000618411 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
SRRT-217ENST00000618411 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
SRRT-217ENST00000618411 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
SRRT-217ENST00000618411 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SRRT-217ENST00000618411 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
SRRT-217ENST00000618411 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 74.6 ms