RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
SRRT-216ENST00000618262 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
SRRT-216ENST00000618262 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
SRRT-216ENST00000618262 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
SRRT-216ENST00000618262 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
SRRT-216ENST00000618262 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
SRRT-216ENST00000618262 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
SRRT-216ENST00000618262 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
SRRT-216ENST00000618262 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
SRRT-216ENST00000618262 MT1EP04732 61 aa4.22□□□□□ -1.73
SRRT-216ENST00000618262 SPRR2EP22531 72 aa4.22□□□□□ -1.73
SRRT-216ENST00000618262 SPRR2BP35325 72 aa4.22□□□□□ -1.73
SRRT-216ENST00000618262 SPRR2AP35326 72 aa4.22□□□□□ -1.73
SRRT-216ENST00000618262 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
SRRT-216ENST00000618262 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
SRRT-216ENST00000618262 NEBP20929 6669 aa4.18□□□□□ -1.74
SRRT-216ENST00000618262 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
SRRT-216ENST00000618262 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
SRRT-216ENST00000618262 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
SRRT-216ENST00000618262 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
SRRT-216ENST00000618262 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
SRRT-216ENST00000618262 MT1LQ93083 61 aa4.11□□□□□ -1.75
SRRT-216ENST00000618262 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
SRRT-216ENST00000618262 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
SRRT-216ENST00000618262 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
SRRT-216ENST00000618262 SPRR2DP22532 72 aa4.05□□□□□ -1.76
SRRT-216ENST00000618262 MT1MQ8N339 61 aa3.99□□□□□ -1.77
SRRT-216ENST00000618262 MT1GP13640 62 aa3.98□□□□□ -1.77
SRRT-216ENST00000618262 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
SRRT-216ENST00000618262 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
SRRT-216ENST00000618262 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
SRRT-216ENST00000618262 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
SRRT-216ENST00000618262 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
SRRT-216ENST00000618262 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
SRRT-216ENST00000618262 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
SRRT-216ENST00000618262 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
SRRT-216ENST00000618262 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
SRRT-216ENST00000618262 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
SRRT-216ENST00000618262 PRM1P04553 51 aa3.67□□□□□ -1.82
SRRT-216ENST00000618262 MT4P47944 62 aa3.66□□□□□ -1.82
SRRT-216ENST00000618262 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
SRRT-216ENST00000618262 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
SRRT-216ENST00000618262 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
SRRT-216ENST00000618262 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
SRRT-216ENST00000618262 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
SRRT-216ENST00000618262 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
SRRT-216ENST00000618262 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
SRRT-216ENST00000618262 MT3P25713 68 aa3.47□□□□□ -1.85
SRRT-216ENST00000618262 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
SRRT-216ENST00000618262 MT1AP04731 61 aa3.42□□□□□ -1.86
SRRT-216ENST00000618262 LCE4AQ5TA78 99 aa3.4□□□□□ -1.86
SRRT-216ENST00000618262 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
SRRT-216ENST00000618262 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
SRRT-216ENST00000618262 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
SRRT-216ENST00000618262 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
SRRT-216ENST00000618262 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
SRRT-216ENST00000618262 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
SRRT-216ENST00000618262 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
SRRT-216ENST00000618262 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
SRRT-216ENST00000618262 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
SRRT-216ENST00000618262 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
SRRT-216ENST00000618262 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SRRT-216ENST00000618262 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
SRRT-216ENST00000618262 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
SRRT-216ENST00000618262 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
SRRT-216ENST00000618262 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
SRRT-216ENST00000618262 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
SRRT-216ENST00000618262 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
SRRT-216ENST00000618262 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
SRRT-216ENST00000618262 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
SRRT-216ENST00000618262 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
SRRT-216ENST00000618262 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
SRRT-216ENST00000618262 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
SRRT-216ENST00000618262 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SRRT-216ENST00000618262 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
SRRT-216ENST00000618262 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
SRRT-216ENST00000618262 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 63.1 ms