RNA–Protein interactions for RNA: ENST00000616058.4

SUCO-210, Transcript of SUN domain containing ossification factor, humanhuman

TSL 1 (best) BASIC

Gene SUCO, Length 5,495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCO-210ENST00000616058 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
SUCO-210ENST00000616058 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
SUCO-210ENST00000616058 LCE2AQ5TA79 106 aaPredicted RBP4.95□□□□□ -1.62
SUCO-210ENST00000616058 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
SUCO-210ENST00000616058 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
SUCO-210ENST00000616058 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
SUCO-210ENST00000616058 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
SUCO-210ENST00000616058 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
SUCO-210ENST00000616058 MT1MQ8N339 61 aa4.86□□□□□ -1.63
SUCO-210ENST00000616058 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
SUCO-210ENST00000616058 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
SUCO-210ENST00000616058 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
SUCO-210ENST00000616058 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
SUCO-210ENST00000616058 USH2AO75445 5202 aa4.58□□□□□ -1.68
SUCO-210ENST00000616058 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
SUCO-210ENST00000616058 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
SUCO-210ENST00000616058 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
SUCO-210ENST00000616058 KMT2DO14686 5537 aa4.53□□□□□ -1.68
SUCO-210ENST00000616058 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
SUCO-210ENST00000616058 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
SUCO-210ENST00000616058 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
SUCO-210ENST00000616058 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
SUCO-210ENST00000616058 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
SUCO-210ENST00000616058 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
SUCO-210ENST00000616058 MT3P25713 68 aa4.46□□□□□ -1.7
SUCO-210ENST00000616058 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
SUCO-210ENST00000616058 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
SUCO-210ENST00000616058 MT4P47944 62 aa4.44□□□□□ -1.7
SUCO-210ENST00000616058 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
SUCO-210ENST00000616058 MT1AP04731 61 aa4.43□□□□□ -1.7
SUCO-210ENST00000616058 PRM1P04553 51 aa4.42□□□□□ -1.7
SUCO-210ENST00000616058 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
SUCO-210ENST00000616058 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
SUCO-210ENST00000616058 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
SUCO-210ENST00000616058 MUC12Q9UKN1 5478 aa4.2□□□□□ -1.74
SUCO-210ENST00000616058 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
SUCO-210ENST00000616058 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
SUCO-210ENST00000616058 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
SUCO-210ENST00000616058 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
SUCO-210ENST00000616058 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
SUCO-210ENST00000616058 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
SUCO-210ENST00000616058 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
SUCO-210ENST00000616058 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
SUCO-210ENST00000616058 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
SUCO-210ENST00000616058 MDN1Q9NU22 5596 aa3.71□□□□□ -1.82
SUCO-210ENST00000616058 NEBP20929 6669 aa3.7□□□□□ -1.82
SUCO-210ENST00000616058 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
SUCO-210ENST00000616058 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
SUCO-210ENST00000616058 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
SUCO-210ENST00000616058 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SUCO-210ENST00000616058 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SUCO-210ENST00000616058 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
SUCO-210ENST00000616058 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
SUCO-210ENST00000616058 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
SUCO-210ENST00000616058 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
SUCO-210ENST00000616058 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
SUCO-210ENST00000616058 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
SUCO-210ENST00000616058 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
SUCO-210ENST00000616058 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.92
SUCO-210ENST00000616058 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
SUCO-210ENST00000616058 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
SUCO-210ENST00000616058 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
SUCO-210ENST00000616058 KRTAP5-3Q6L8H2 238 aa2.94□□□□□ -1.94
SUCO-210ENST00000616058 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
SUCO-210ENST00000616058 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
SUCO-210ENST00000616058 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
SUCO-210ENST00000616058 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
SUCO-210ENST00000616058 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
SUCO-210ENST00000616058 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
SUCO-210ENST00000616058 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
SUCO-210ENST00000616058 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
SUCO-210ENST00000616058 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
SUCO-210ENST00000616058 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
SUCO-210ENST00000616058 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
SUCO-210ENST00000616058 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
SUCO-210ENST00000616058 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
SUCO-210ENST00000616058 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms