RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 MT1LQ93083 61 aa3.18□□□□□ -1.9
CLTCL1-208ENST00000615606 LCE3BQ5TA77 95 aa3.15□□□□□ -1.91
CLTCL1-208ENST00000615606 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
CLTCL1-208ENST00000615606 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
CLTCL1-208ENST00000615606 MT1MQ8N339 61 aa3.08□□□□□ -1.92
CLTCL1-208ENST00000615606 KRTAP4-7Q9BYR0 210 aa3.06□□□□□ -1.92
CLTCL1-208ENST00000615606 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
CLTCL1-208ENST00000615606 FSIP2Q5CZC0 6907 aa3.04□□□□□ -1.92
CLTCL1-208ENST00000615606 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
CLTCL1-208ENST00000615606 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
CLTCL1-208ENST00000615606 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
CLTCL1-208ENST00000615606 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.95□□□□□ -1.94
CLTCL1-208ENST00000615606 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
CLTCL1-208ENST00000615606 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
CLTCL1-208ENST00000615606 MT4P47944 62 aa2.93□□□□□ -1.94
CLTCL1-208ENST00000615606 LCE1AQ5T7P2 110 aa2.92□□□□□ -1.94
CLTCL1-208ENST00000615606 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
CLTCL1-208ENST00000615606 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
CLTCL1-208ENST00000615606 MUC2Q02817 5179 aa2.91□□□□□ -1.94
CLTCL1-208ENST00000615606 MT3P25713 68 aa2.91□□□□□ -1.94
CLTCL1-208ENST00000615606 LOC100996750A0A140TA64 210 aa2.88□□□□□ -1.95
CLTCL1-208ENST00000615606 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
CLTCL1-208ENST00000615606 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
CLTCL1-208ENST00000615606 MT1AP04731 61 aa2.84□□□□□ -1.95
CLTCL1-208ENST00000615606 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
CLTCL1-208ENST00000615606 KRTAP2-1Q9BYU5 128 aa2.83□□□□□ -1.96
CLTCL1-208ENST00000615606 LCE5AQ5TCM9 118 aa2.79□□□□□ -1.96
CLTCL1-208ENST00000615606 USH2AO75445 5202 aa2.77□□□□□ -1.97
CLTCL1-208ENST00000615606 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
CLTCL1-208ENST00000615606 PRM1P04553 51 aa2.69□□□□□ -1.98
CLTCL1-208ENST00000615606 LCE1DQ5T752 114 aa2.68□□□□□ -1.98
CLTCL1-208ENST00000615606 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
CLTCL1-208ENST00000615606 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
CLTCL1-208ENST00000615606 KRTAP9-4Q9BYQ2 154 aa2.63□□□□□ -1.99
CLTCL1-208ENST00000615606 KRTAP5-9P26371 169 aa2.62□□□□□ -1.99
CLTCL1-208ENST00000615606 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
CLTCL1-208ENST00000615606 KRTAP4-9Q9BYQ8 210 aa2.61□□□□□ -1.99
CLTCL1-208ENST00000615606 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -1.99
CLTCL1-208ENST00000615606 SSPOA2VEC9 5147 aa2.58□□□□□ -2
CLTCL1-208ENST00000615606 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
CLTCL1-208ENST00000615606 NEBP20929 6669 aa2.56□□□□□ -2
CLTCL1-208ENST00000615606 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
CLTCL1-208ENST00000615606 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
CLTCL1-208ENST00000615606 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
CLTCL1-208ENST00000615606 KMT2DO14686 5537 aa2.49□□□□□ -2.01
CLTCL1-208ENST00000615606 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
CLTCL1-208ENST00000615606 KRTAP9-9Q9BYP9 154 aa2.39□□□□□ -2.03
CLTCL1-208ENST00000615606 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
CLTCL1-208ENST00000615606 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
CLTCL1-208ENST00000615606 KRTAP4-6Q9BYQ5 205 aa2.32□□□□□ -2.04
CLTCL1-208ENST00000615606 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
CLTCL1-208ENST00000615606 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
CLTCL1-208ENST00000615606 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
CLTCL1-208ENST00000615606 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
CLTCL1-208ENST00000615606 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
CLTCL1-208ENST00000615606 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
CLTCL1-208ENST00000615606 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
CLTCL1-208ENST00000615606 KRTAP4-11Q9BYQ6 195 aa2.08□□□□□ -2.08
CLTCL1-208ENST00000615606 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
CLTCL1-208ENST00000615606 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
CLTCL1-208ENST00000615606 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
CLTCL1-208ENST00000615606 KRTAP4-12Q9BQ66 201 aa1.9□□□□□ -2.11
CLTCL1-208ENST00000615606 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
CLTCL1-208ENST00000615606 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
CLTCL1-208ENST00000615606 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
CLTCL1-208ENST00000615606 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
CLTCL1-208ENST00000615606 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
CLTCL1-208ENST00000615606 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
CLTCL1-208ENST00000615606 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
CLTCL1-208ENST00000615606 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.16
CLTCL1-208ENST00000615606 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.16
CLTCL1-208ENST00000615606 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
CLTCL1-208ENST00000615606 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
CLTCL1-208ENST00000615606 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
CLTCL1-208ENST00000615606 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
CLTCL1-208ENST00000615606 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
CLTCL1-208ENST00000615606 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
CLTCL1-208ENST00000615606 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms