RNA–Protein interactions for RNA: ENST00000615544.4

ACTG1-216, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG1, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-216ENST00000615544 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
ACTG1-216ENST00000615544 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
ACTG1-216ENST00000615544 SPRR2EP22531 72 aa4.69□□□□□ -1.66
ACTG1-216ENST00000615544 SPRR2BP35325 72 aa4.69□□□□□ -1.66
ACTG1-216ENST00000615544 SPRR2AP35326 72 aa4.69□□□□□ -1.66
ACTG1-216ENST00000615544 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
ACTG1-216ENST00000615544 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
ACTG1-216ENST00000615544 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
ACTG1-216ENST00000615544 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
ACTG1-216ENST00000615544 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
ACTG1-216ENST00000615544 MT1EP04732 61 aa4.6□□□□□ -1.67
ACTG1-216ENST00000615544 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
ACTG1-216ENST00000615544 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
ACTG1-216ENST00000615544 H3BS24 57 aa4.52□□□□□ -1.69
ACTG1-216ENST00000615544 SPRR2DP22532 72 aa4.52□□□□□ -1.69
ACTG1-216ENST00000615544 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
ACTG1-216ENST00000615544 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.69
ACTG1-216ENST00000615544 MT1LQ93083 61 aa4.45□□□□□ -1.7
ACTG1-216ENST00000615544 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
ACTG1-216ENST00000615544 MT1GP13640 62 aa4.4□□□□□ -1.71
ACTG1-216ENST00000615544 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
ACTG1-216ENST00000615544 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
ACTG1-216ENST00000615544 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
ACTG1-216ENST00000615544 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
ACTG1-216ENST00000615544 MT1MQ8N339 61 aa4.37□□□□□ -1.71
ACTG1-216ENST00000615544 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
ACTG1-216ENST00000615544 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
ACTG1-216ENST00000615544 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
ACTG1-216ENST00000615544 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
ACTG1-216ENST00000615544 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.73
ACTG1-216ENST00000615544 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
ACTG1-216ENST00000615544 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
ACTG1-216ENST00000615544 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
ACTG1-216ENST00000615544 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
ACTG1-216ENST00000615544 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
ACTG1-216ENST00000615544 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
ACTG1-216ENST00000615544 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
ACTG1-216ENST00000615544 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
ACTG1-216ENST00000615544 MT4P47944 62 aa3.95□□□□□ -1.78
ACTG1-216ENST00000615544 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.78
ACTG1-216ENST00000615544 INE1O15225 51 aa3.88□□□□□ -1.79
ACTG1-216ENST00000615544 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
ACTG1-216ENST00000615544 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
ACTG1-216ENST00000615544 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
ACTG1-216ENST00000615544 MT1AP04731 61 aa3.78□□□□□ -1.8
ACTG1-216ENST00000615544 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
ACTG1-216ENST00000615544 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
ACTG1-216ENST00000615544 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
ACTG1-216ENST00000615544 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
ACTG1-216ENST00000615544 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
ACTG1-216ENST00000615544 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
ACTG1-216ENST00000615544 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
ACTG1-216ENST00000615544 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
ACTG1-216ENST00000615544 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
ACTG1-216ENST00000615544 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
ACTG1-216ENST00000615544 MT3P25713 68 aa3.42□□□□□ -1.86
ACTG1-216ENST00000615544 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
ACTG1-216ENST00000615544 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
ACTG1-216ENST00000615544 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
ACTG1-216ENST00000615544 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
ACTG1-216ENST00000615544 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
ACTG1-216ENST00000615544 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
ACTG1-216ENST00000615544 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
ACTG1-216ENST00000615544 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
ACTG1-216ENST00000615544 PRM1P04553 51 aa2.99□□□□□ -1.93
ACTG1-216ENST00000615544 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
ACTG1-216ENST00000615544 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
ACTG1-216ENST00000615544 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
ACTG1-216ENST00000615544 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
ACTG1-216ENST00000615544 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
ACTG1-216ENST00000615544 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
ACTG1-216ENST00000615544 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
ACTG1-216ENST00000615544 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
ACTG1-216ENST00000615544 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
ACTG1-216ENST00000615544 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
ACTG1-216ENST00000615544 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
ACTG1-216ENST00000615544 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 81.3 ms